Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 Y_RNA.673-201ENST00000516306 88 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 SNORA31.8-201ENST00000516327 108 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 Y_RNA.713-201ENST00000517013 96 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 RNA5SP165-201ENST00000517142 115 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 RN7SKP147-201ENST00000517154 244 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 TRAV28-201ENST00000557548 323 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 AC104581.2-201ENST00000572227 430 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 AC012433.1-201ENST00000588916 398 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 AC006557.5-201ENST00000603126 811 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 AL365434.2-201ENST00000607979 234 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 AC131238.1-201ENST00000617135 328 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 AC018529.3-201ENST00000624212 2254 ntBASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.38□□□□□ -1.71
LRFN4Q6PJG9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 Y_RNA.117-201ENST00000363294 101 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 U3.15-201ENST00000365398 212 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 RNU6-708P-201ENST00000384217 107 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 RPS29P13-201ENST00000402041 169 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 RPL21P38-201ENST00000418090 167 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AC093162.1-201ENST00000419682 124 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AC073850.1-201ENST00000449243 255 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 RN7SL517P-201ENST00000462240 305 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 RPL12P20-201ENST00000475538 479 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 RPSAP50-201ENST00000481955 852 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AC139453.3-201ENST00000493276 369 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 HMGB1P35-201ENST00000503360 598 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 SNORA70.16-201ENST00000516390 95 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 RN7SKP40-201ENST00000517211 242 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AF186190.1-201ENST00000517470 480 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AL442163.3-201ENST00000554110 156 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 EDDM3DP-201ENST00000554692 434 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AC023575.1-201ENST00000580510 358 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AC053481.4-201ENST00000583164 216 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AC098479.1-201ENST00000609225 154 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 AP002799.1-201ENST00000623552 423 ntBASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN4Q6PJG9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 MAPK10-320ENST00000641462 6696 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 Y_RNA.20-201ENST00000362479 113 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 RNA5SP305-201ENST00000362665 119 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 Y_RNA.105-201ENST00000363182 111 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 Y_RNA.416-201ENST00000384014 113 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 SNORA12.2-201ENST00000391040 156 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 RNU6-121P-201ENST00000410525 99 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 RNU2-25P-201ENST00000411041 191 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 RPL23AP27-201ENST00000415161 451 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 RAC1P3-201ENST00000416129 580 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 AC096920.1-201ENST00000423991 241 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 AC098614.2-201ENST00000426040 255 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 RPL21P91-201ENST00000429231 479 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 RN7SL97P-201ENST00000486780 299 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 ENPP7P9-201ENST00000514456 627 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 MIR2355-201ENST00000517199 87 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 CYCSP40-201ENST00000575927 294 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 AC007448.1-201ENST00000582714 234 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 AC087783.2-201ENST00000605070 562 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 AC099506.2-201ENST00000623074 221 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 U4.7-201ENST00000638126 106 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 AC008568.2-201ENST00000623862 2313 ntBASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN4Q6PJG9 RN7SKP104-201ENST00000362605 328 ntBASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 RNU6-200P-201ENST00000364743 107 ntBASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 Y_RNA.458-201ENST00000384240 102 ntBASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 AL357515.1-201ENST00000402967 542 ntBASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 RNU6-1203P-201ENST00000410703 110 ntBASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 RN7SKP213-201ENST00000410746 298 ntBASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 SDAD1P3-201ENST00000427380 333 ntBASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 MTCO3P29-201ENST00000432119 779 ntBASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 AC004383.1-201ENST00000438135 289 ntBASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.35□□□□□ -1.71
LRFN4Q6PJG9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms