Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.43□□□□□ -1.7
CNKSR3Q6P9H4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNKSR3Q6P9H4 AC103710.2-202ENST00000641454 2853 ntBASIC4.43□□□□□ -1.7
CNKSR3Q6P9H4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 RNU6-525P-201ENST00000363685 104 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 RNU6-263P-201ENST00000363811 107 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 Y_RNA.350-201ENST00000365409 98 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 Y_RNA.380-201ENST00000365663 111 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 RNU6-306P-201ENST00000384617 107 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 RNU6-95P-201ENST00000384697 107 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 MT-TW-201ENST00000387382 68 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 SNORD70.1-201ENST00000391007 85 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 RPL21P1-201ENST00000399532 476 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 RNU4-78P-201ENST00000410940 126 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 USMG5P1-201ENST00000425964 177 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 USP9YP30-201ENST00000430729 455 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 ABCF2P2-201ENST00000450549 296 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 SNORD5.1-201ENST00000458800 75 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 SNORD127-201ENST00000458892 86 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 SNORD108-201ENST00000459332 71 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 RN7SL323P-201ENST00000494712 295 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 RNU6-27P-201ENST00000516146 107 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 MIR3128-201ENST00000581957 66 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 AC078899.3-201ENST00000599065 212 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 AC019176.2-201ENST00000611579 315 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 AL606534.2-204ENST00000635008 178 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 AC009093.8-201ENST00000641769 292 ntBASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CNKSR3Q6P9H4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC139713.2-215ENST00000641428 5037 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC027290.2-201ENST00000623210 18662 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC010615.1-201ENST00000594254 1764 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 RNU6-989P-201ENST00000362756 107 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 Y_RNA.60-201ENST00000362831 98 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 Y_RNA.222-201ENST00000364264 102 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 RNU6-837P-201ENST00000391056 108 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 Z99755.1-201ENST00000414048 380 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 RPLP0P7-201ENST00000416050 667 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 PGBD4P6-201ENST00000421501 610 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC087884.1-201ENST00000469738 328 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC022616.4-201ENST00000522985 181 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AP000889.1-201ENST00000530968 660 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC091516.1-201ENST00000549191 703 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC025627.2-201ENST00000576220 160 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 MIR3941-201ENST00000582572 103 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AL391261.4-201ENST00000616012 481 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC015967.1-201ENST00000619893 476 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AC091925.2-201ENST00000625059 256 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 AL356489.2-201ENST00000566968 3528 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 MAPK10-372ENST00000641954 3413 ntBASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.41□□□□□ -1.7
CNKSR3Q6P9H4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CNKSR3Q6P9H4 ZNF285B-201ENST00000561698 1767 ntBASIC4.4□□□□□ -1.7
CNKSR3Q6P9H4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CNKSR3Q6P9H4 AL731532.2-201ENST00000623542 1953 ntBASIC4.4□□□□□ -1.7
CNKSR3Q6P9H4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CNKSR3Q6P9H4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNKSR3Q6P9H4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNKSR3Q6P9H4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-1059P-201ENST00000363752 98 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 RNA5SP22-201ENST00000365393 109 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.399-201ENST00000383955 105 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-128P-201ENST00000383976 107 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.461-201ENST00000384263 103 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-55P-201ENST00000411092 107 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-387P-201ENST00000411331 105 ntBASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.4□□□□□ -1.71
CNKSR3Q6P9H4 AC091286.1-201ENST00000431233 461 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms