Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 RNU6-928P-201ENST00000516876 104 ntBASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AC008269.2-201ENST00000561915 1105 ntBASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AC025594.3-201ENST00000613068 790 ntBASIC1.18□□□□□ -2.22
NUP188Q5SRE5 CR848007.1-201ENST00000442354 1699 ntBASIC1.18□□□□□ -2.22
NUP188Q5SRE5 CCT4P2-201ENST00000233836 1548 ntBASIC1.18□□□□□ -2.22
NUP188Q5SRE5 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 MRPS33P3-201ENST00000513456 322 ntBASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 AP001330.4-201ENST00000604350 154 ntBASIC1.18□□□□□ -2.22
NUP188Q5SRE5 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
NUP188Q5SRE5 SNORD65-201ENST00000391079 73 ntBASIC1.17□□□□□ -2.22
NUP188Q5SRE5 RPL30P4-201ENST00000429309 333 ntBASIC1.17□□□□□ -2.22
NUP188Q5SRE5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
NUP188Q5SRE5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.17□□□□□ -2.22
NUP188Q5SRE5 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.17□□□□□ -2.22
NUP188Q5SRE5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NUP188Q5SRE5 AC093752.1-206ENST00000511823 336 ntBASIC1.17□□□□□ -2.22
NUP188Q5SRE5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.17□□□□□ -2.22
NUP188Q5SRE5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.17□□□□□ -2.22
NUP188Q5SRE5 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.17□□□□□ -2.22
NUP188Q5SRE5 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.17□□□□□ -2.22
NUP188Q5SRE5 AC078899.2-201ENST00000595282 212 ntBASIC1.17□□□□□ -2.22
NUP188Q5SRE5 GAS5-AS1-201ENST00000602767 694 ntBASIC1.17□□□□□ -2.22
NUP188Q5SRE5 DUXAP11-201ENST00000603858 526 ntBASIC1.17□□□□□ -2.22
NUP188Q5SRE5 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
NUP188Q5SRE5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
NUP188Q5SRE5 MIR676-201ENST00000390702 67 ntBASIC1.16□□□□□ -2.22
NUP188Q5SRE5 RNA5SP193-201ENST00000410353 107 ntBASIC1.16□□□□□ -2.22
NUP188Q5SRE5 RNU1-98P-201ENST00000458992 160 ntBASIC1.16□□□□□ -2.22
NUP188Q5SRE5 AC005908.1-201ENST00000468701 347 ntBASIC1.16□□□□□ -2.22
NUP188Q5SRE5 KATNBL1P4-201ENST00000503545 918 ntBASIC1.16□□□□□ -2.22
NUP188Q5SRE5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.16□□□□□ -2.22
NUP188Q5SRE5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.16□□□□□ -2.22
NUP188Q5SRE5 AP003072.2-201ENST00000527756 676 ntBASIC1.16□□□□□ -2.22
NUP188Q5SRE5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
NUP188Q5SRE5 MTCYBP23-201ENST00000558717 1102 ntBASIC1.16□□□□□ -2.22
NUP188Q5SRE5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.16□□□□□ -2.22
NUP188Q5SRE5 AP003072.5-201ENST00000623872 773 ntBASIC1.16□□□□□ -2.22
NUP188Q5SRE5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.16□□□□□ -2.22
NUP188Q5SRE5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
NUP188Q5SRE5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NUP188Q5SRE5 AC080100.1-201ENST00000624239 5356 ntBASIC1.16□□□□□ -2.22
NUP188Q5SRE5 SDAD1P3-201ENST00000427380 333 ntBASIC1.15□□□□□ -2.22
NUP188Q5SRE5 RPS15AP27-201ENST00000449183 343 ntBASIC1.15□□□□□ -2.22
NUP188Q5SRE5 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.15□□□□□ -2.22
NUP188Q5SRE5 MIR4711-201ENST00000578274 70 ntBASIC1.15□□□□□ -2.22
NUP188Q5SRE5 ZNF92P3-201ENST00000596594 954 ntBASIC1.15□□□□□ -2.22
NUP188Q5SRE5 AC021749.1-201ENST00000604322 607 ntBASIC1.15□□□□□ -2.22
NUP188Q5SRE5 AL118508.4-201ENST00000624142 1176 ntBASIC1.15□□□□□ -2.22
NUP188Q5SRE5 RNU6-263P-201ENST00000363811 107 ntBASIC1.15□□□□□ -2.23
NUP188Q5SRE5 Y_RNA.294-201ENST00000364916 102 ntBASIC1.15□□□□□ -2.23
NUP188Q5SRE5 VTRNA1-3-201ENST00000365645 89 ntBASIC1.15□□□□□ -2.23
NUP188Q5SRE5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
NUP188Q5SRE5 MIR1197-201ENST00000408818 88 ntBASIC1.15□□□□□ -2.23
NUP188Q5SRE5 RNU6-955P-201ENST00000410497 104 ntBASIC1.15□□□□□ -2.23
NUP188Q5SRE5 RNU4-78P-201ENST00000410940 126 ntBASIC1.15□□□□□ -2.23
NUP188Q5SRE5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.15□□□□□ -2.23
NUP188Q5SRE5 OSTCP8-201ENST00000445117 448 ntBASIC1.15□□□□□ -2.23
NUP188Q5SRE5 SNORA31.25-201ENST00000517242 134 ntBASIC1.15□□□□□ -2.23
NUP188Q5SRE5 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.15□□□□□ -2.23
NUP188Q5SRE5 AC079395.3-201ENST00000615161 484 ntBASIC1.15□□□□□ -2.23
NUP188Q5SRE5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 MIR767-201ENST00000390228 109 ntBASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 RPL27AP8-201ENST00000424277 446 ntBASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 USP12PX-201ENST00000432383 1057 ntBASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AL500527.1-201ENST00000448532 255 ntBASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AL160236.1-201ENST00000556317 195 ntBASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AC104229.1-201ENST00000561364 255 ntBASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AC040174.2-201ENST00000602701 465 ntBASIC1.14□□□□□ -2.23
NUP188Q5SRE5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.14□□□□□ -2.23
NUP188Q5SRE5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
NUP188Q5SRE5 SNORD14B-201ENST00000364533 90 ntBASIC1.13□□□□□ -2.23
NUP188Q5SRE5 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.13□□□□□ -2.23
NUP188Q5SRE5 U3.20-201ENST00000390909 217 ntBASIC1.13□□□□□ -2.23
NUP188Q5SRE5 AL356432.1-201ENST00000405809 419 ntBASIC1.13□□□□□ -2.23
NUP188Q5SRE5 OR6C66P-201ENST00000414917 930 ntBASIC1.13□□□□□ -2.23
NUP188Q5SRE5 AC087884.1-201ENST00000469738 328 ntBASIC1.13□□□□□ -2.23
NUP188Q5SRE5 AC117503.1-201ENST00000472241 394 ntBASIC1.13□□□□□ -2.23
NUP188Q5SRE5 OR52A4P-202ENST00000481634 799 ntBASIC1.13□□□□□ -2.23
NUP188Q5SRE5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.13□□□□□ -2.23
NUP188Q5SRE5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.13□□□□□ -2.23
NUP188Q5SRE5 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.13□□□□□ -2.23
NUP188Q5SRE5 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.13□□□□□ -2.23
NUP188Q5SRE5 AC090666.1-201ENST00000578241 445 ntBASIC1.13□□□□□ -2.23
NUP188Q5SRE5 AL137003.2-201ENST00000606924 2538 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms