Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNAP47Q5SQN1 AC068254.2-201ENST00000623938 3577 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 Y_RNA.48-201ENST00000362710 103 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 RNA5SP447-201ENST00000363749 119 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 U8.8-201ENST00000365399 135 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 RNU6-827P-201ENST00000365553 106 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 Y_RNA.389-201ENST00000383924 113 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 MIR708-201ENST00000390708 88 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 RNU2-68P-201ENST00000410878 191 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 AC092573.2-201ENST00000434546 243 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 AC112492.4-201ENST00000456549 352 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 RPL23AP45-201ENST00000476406 468 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 HMGN2P13-201ENST00000476476 274 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 RPL31P13-201ENST00000484151 370 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 7SK.7-201ENST00000603504 247 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 U3.53-201ENST00000628922 216 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 AL672167.1-203ENST00000641299 2975 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 MARK2P15-201ENST00000432204 2186 ntBASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNAP47Q5SQN1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AC007390.2-201ENST00000606229 3803 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 RPL9P7-201ENST00000330965 580 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 RNU6-600P-201ENST00000362524 99 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 Y_RNA.176-201ENST00000363815 109 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 RN7SKP227-201ENST00000364445 330 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 RNU6-99P-201ENST00000364721 107 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 Y_RNA.314-201ENST00000365114 102 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 Y_RNA.485-201ENST00000384395 102 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 Y_RNA.577-201ENST00000384794 101 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 Z98745.1-201ENST00000402553 494 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 MIR1302-3-201ENST00000408128 138 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AL117339.3-201ENST00000418733 162 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 DPH3P2-201ENST00000422618 250 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AC007560.1-201ENST00000426912 237 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AC004938.1-201ENST00000438468 308 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AL513043.1-201ENST00000439124 535 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 ANP32BP2-201ENST00000454525 545 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AL353752.1-201ENST00000454946 260 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 RPL9P9-202ENST00000466501 579 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 FO393415.2-201ENST00000480085 343 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AC093840.1-201ENST00000511599 336 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 RNA5SP249-201ENST00000516127 99 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 RNU6-572P-201ENST00000516724 80 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AC008121.1-201ENST00000603244 268 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AC136601.2-201ENST00000604356 474 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 AC004805.2-201ENST00000605382 482 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 PRR13P7-201ENST00000605538 430 ntBASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNAP47Q5SQN1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 ZNF137P-201ENST00000456718 1920 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 RNY1P16-201ENST00000363063 111 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 Y_RNA.193-201ENST00000363979 102 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 MIR129-1-201ENST00000384972 72 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 MIR34A-201ENST00000385130 110 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 RNA5SP397-201ENST00000391323 118 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 AL591034.2-201ENST00000402839 359 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 AL138885.1-201ENST00000405921 675 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 RNU6-101P-201ENST00000410323 104 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 AC087650.1-201ENST00000431445 468 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 SNRPEP9-201ENST00000436794 238 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 AL731563.1-201ENST00000442202 214 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 AL078601.1-201ENST00000444542 271 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 AL162591.2-201ENST00000449634 317 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 AC092798.1-201ENST00000458542 409 ntBASIC4.49□□□□□ -1.69
SNAP47Q5SQN1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms