| CTSL3P | Q5NE16 | AL356596.1-201 | ENST00000624230 | 379 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | ANP32E-209 | ENST00000616917 | 2989 nt | TSL 2 BASIC | 2.27 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RNU5A-8P-201 | ENST00000364102 | 114 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RNU6-512P-201 | ENST00000364438 | 103 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AKR1C1-201 | ENST00000380859 | 858 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | XGY1-201 | ENST00000381172 | 446 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | MIR524-201 | ENST00000385242 | 87 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RNU6-1242P-201 | ENST00000391052 | 103 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC119751.3-201 | ENST00000399720 | 670 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | CXADR-203 | ENST00000400165 | 603 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AL445669.1-201 | ENST00000426743 | 755 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AL138775.1-201 | ENST00000429539 | 575 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | LINC01724-201 | ENST00000430519 | 621 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AL161651.1-201 | ENST00000440882 | 223 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AL118523.1-201 | ENST00000444436 | 480 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AL365204.2-201 | ENST00000446754 | 687 nt | TSL 2 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | HMGN2P10-201 | ENST00000448085 | 265 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | GAS5-221 | ENST00000450589 | 632 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | LINC01473-203 | ENST00000456653 | 1079 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | WDR78-207 | ENST00000488333 | 613 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC055855.1-201 | ENST00000489563 | 579 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC104090.1-201 | ENST00000506341 | 1171 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | EPGN-208 | ENST00000509145 | 222 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | HMGB3P3-201 | ENST00000510526 | 400 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | SUB1-211 | ENST00000512913 | 684 nt | APPRIS P1 TSL 2 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RNA5SP24-201 | ENST00000516478 | 95 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AP003122.3-201 | ENST00000526316 | 255 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | DEFB108A-201 | ENST00000530110 | 222 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AL133370.1-201 | ENST00000554679 | 537 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC021739.1-201 | ENST00000559631 | 174 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | FAM96A-206 | ENST00000559950 | 561 nt | TSL 2 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | LINC02165-201 | ENST00000563061 | 443 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC141273.1-201 | ENST00000565300 | 479 nt | TSL 5 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | MIR5571-201 | ENST00000577998 | 113 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RPP40P2-201 | ENST00000603596 | 712 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | THRA1/BTR-203 | ENST00000604191 | 571 nt | TSL 4 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AP000484.1-201 | ENST00000620067 | 1252 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC025034.2-201 | ENST00000623264 | 286 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC007405.1-203 | ENST00000623667 | 932 nt | TSL 5 BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AL136313.1-201 | ENST00000624804 | 202 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | NAALADL2-203 | ENST00000454872 | 9865 nt | APPRIS P1 TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | TTK-202 | ENST00000369798 | 3010 nt | APPRIS P3 TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | COMMD8-201 | ENST00000381571 | 1469 nt | APPRIS P1 TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | DPY19L2P1-203 | ENST00000458672 | 3347 nt | TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | MTND4P35-201 | ENST00000604257 | 1375 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC006020.1-201 | ENST00000420179 | 1854 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RNU6-1284P-201 | ENST00000363701 | 100 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RNU6-906P-201 | ENST00000384700 | 70 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | MIR634-201 | ENST00000385208 | 97 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | MIR147B-201 | ENST00000390185 | 80 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AL139397.2-201 | ENST00000404529 | 772 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | NDUFS5P1-201 | ENST00000405668 | 289 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | U3.37-201 | ENST00000408528 | 213 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AF241725.1-201 | ENST00000416182 | 480 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AP000432.1-201 | ENST00000416641 | 516 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | VPS26BP1-201 | ENST00000417155 | 755 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | ISCA1P1-201 | ENST00000426679 | 387 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC236972.1-201 | ENST00000433225 | 199 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC104688.1-201 | ENST00000447158 | 419 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | MTATP6P7-201 | ENST00000453315 | 681 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | ANKRD26P4-201 | ENST00000455755 | 950 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC108059.3-201 | ENST00000456388 | 214 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | USP9YP25-201 | ENST00000457708 | 443 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RPL23AP41-201 | ENST00000484754 | 458 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | SPINK7-205 | ENST00000523535 | 299 nt | TSL 2 BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | CD44-AS1-201 | ENST00000528869 | 587 nt | TSL 4 BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC087241.2-201 | ENST00000535801 | 324 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | DISC1FP1-204 | ENST00000563681 | 466 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | MIR544B-201 | ENST00000582372 | 78 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | MIR4765-201 | ENST00000585007 | 77 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC005261.5-201 | ENST00000596280 | 355 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC022150.3-201 | ENST00000599143 | 880 nt | TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC104237.2-201 | ENST00000612456 | 443 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC244093.3-201 | ENST00000615419 | 411 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC026523.1-201 | ENST00000617221 | 490 nt | TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | Clostridiales-1.2-201 | ENST00000636724 | 160 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | PARPBP-203 | ENST00000392911 | 1916 nt | TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | FGF7-201 | ENST00000267843 | 5467 nt | APPRIS P1 TSL 1 (best) BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | DNAH7-201 | ENST00000312428 | 12394 nt | APPRIS P1 TSL 1 (best) BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | Z82209.1-201 | ENST00000422141 | 2135 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | LRRC6-212 | ENST00000618342 | 1754 nt | APPRIS ALT1 TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | MAPK8-202 | ENST00000374174 | 739 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | TRAJ40-201 | ENST00000390497 | 61 nt | APPRIS P1 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RNU6-757P-201 | ENST00000410334 | 100 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | PIGPP2-201 | ENST00000411569 | 458 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | GPC5-IT1-201 | ENST00000416664 | 658 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | CYCSP48-201 | ENST00000417124 | 323 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | ELOCP9-201 | ENST00000418624 | 239 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC016710.1-201 | ENST00000421326 | 466 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | SCEL-AS1-201 | ENST00000456280 | 493 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RPF2P2-201 | ENST00000504693 | 896 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | LINC02118-202 | ENST00000510583 | 419 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC096736.1-201 | ENST00000512609 | 947 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | LINC01256-201 | ENST00000513270 | 508 nt | TSL 2 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | LINC01216-201 | ENST00000515728 | 824 nt | TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | RNA5SP281-201 | ENST00000516504 | 135 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC027701.1-201 | ENST00000520155 | 823 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC013828.2-201 | ENST00000532487 | 235 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AL121821.2-201 | ENST00000556081 | 394 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CTSL3P | Q5NE16 | AC007610.2-201 | ENST00000566770 | 666 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |