Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SNORA31-201ENST00000362607 130 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 SNORA51.2-201ENST00000364595 132 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 SNORD115-7-201ENST00000365306 82 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 MIR199A2-201ENST00000385289 110 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AL162578.1-201ENST00000406202 378 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AL354719.1-201ENST00000406535 843 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AL451054.2-201ENST00000420896 202 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 RPL35AP12-201ENST00000425362 338 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 HMGB1P37-201ENST00000439613 609 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 TXNP1-201ENST00000441872 371 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 MRPL50P4-201ENST00000446432 475 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 HMGN2P7-201ENST00000456186 273 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 GMFBP1-201ENST00000467831 427 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 RN7SL330P-201ENST00000469709 307 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AL163973.1-201ENST00000484753 577 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 RN7SKP219-201ENST00000516825 296 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 RNA5SP503-201ENST00000517047 117 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 RN7SKP258-201ENST00000517151 304 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AC022690.1-201ENST00000526681 550 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AP005435.4-201ENST00000529514 284 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AP004242.1-201ENST00000533701 349 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 VN1R80P-201ENST00000597126 338 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AC243960.4-201ENST00000600532 288 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 BDH2P1-201ENST00000602288 736 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 MIR3651-201ENST00000630427 90 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 API5P2-201ENST00000397055 1498 ntBASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.89□□□□□ -1.79
SLC44A4Q53GD3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 Y_RNA.157-201ENST00000363638 102 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 RNU6-288P-201ENST00000363690 104 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 RNA5SP50-201ENST00000363731 107 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 SNORA32.2-201ENST00000384049 122 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AL354751.2-201ENST00000415471 210 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 RPL27AP8-201ENST00000424277 446 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC073063.1-201ENST00000434352 607 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 RPL7P12-201ENST00000446719 750 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 HMGB3P8-201ENST00000449709 577 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 SNORD105B-201ENST00000458770 79 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC004801.2-202ENST00000463559 283 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC112206.3-201ENST00000514578 389 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 RNU6-123P-201ENST00000516163 102 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 SNORA70.16-201ENST00000516390 95 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 RNU2-58P-201ENST00000516403 183 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 RNU7-30P-201ENST00000516835 62 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC105029.1-201ENST00000520250 669 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC107953.1-201ENST00000522216 297 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 SUB1P1-201ENST00000524415 382 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 RPL23AP84-201ENST00000571193 464 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 MIR3690-201ENST00000580266 75 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC005498.1-201ENST00000592125 465 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 PART1_1.1-201ENST00000611761 217 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC130324.3-201ENST00000614165 542 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC092628.2-201ENST00000622492 339 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 U6.114-201ENST00000636407 96 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 AC119674.1-207ENST00000641355 633 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SLC44A4Q53GD3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AL049781.1-201ENST00000623195 3585 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms