Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 BPY2DP-201ENST00000422208 265 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 RPS15AP36-201ENST00000492022 382 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 CKS1BP2-201ENST00000497342 240 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 RNU1-41P-201ENST00000516161 162 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 RNU1-48P-201ENST00000516400 162 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AC024619.4-201ENST00000580924 316 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 SNORD39.3-201ENST00000584451 71 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AC104763.2-201ENST00000604179 382 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 AL391597.1-201ENST00000618707 694 ntBASIC1.17□□□□□ -2.22
CCDC58Q4VC31 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC58Q4VC31 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 RNU6-76P-201ENST00000384060 104 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 AC018630.2-202ENST00000422992 927 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 TOMM22P2-201ENST00000430735 237 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 AC099513.1-201ENST00000490423 301 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 FAM92A1P2-202ENST00000504766 877 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 AC015720.1-201ENST00000565251 277 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 AC115989.2-201ENST00000578640 563 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 TUG1_1.1-201ENST00000610654 145 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 RMST_6.1-201ENST00000611980 203 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 AC026634.1-201ENST00000634369 198 ntBASIC1.16□□□□□ -2.22
CCDC58Q4VC31 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.16□□□□□ -2.22
CCDC58Q4VC31 GDI2P1-201ENST00000429312 1336 ntBASIC1.15□□□□□ -2.22
CCDC58Q4VC31 RNA5SP190-201ENST00000365222 118 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 RNU6-140P-201ENST00000384566 108 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AC098831.1-201ENST00000440661 216 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.15□□□□□ -2.23
CCDC58Q4VC31 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC58Q4VC31 MTCO3P2-201ENST00000457365 171 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.15□□□□□ -2.23
CCDC58Q4VC31 MTCYBP18-201ENST00000501056 747 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.15□□□□□ -2.23
CCDC58Q4VC31 RNA5SP445-201ENST00000515889 115 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AC023813.2-201ENST00000564321 469 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AC026271.5-201ENST00000577873 130 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.6-201ENST00000603753 252 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 MTCYBP22-201ENST00000603788 447 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.11-201ENST00000604059 253 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.10-201ENST00000604330 253 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AC008162.1-201ENST00000604718 254 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.1-201ENST00000604752 252 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.2-201ENST00000604983 252 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.5-201ENST00000605253 252 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.4-201ENST00000605279 254 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.12-201ENST00000605291 253 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.8-201ENST00000605353 252 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.9-201ENST00000605428 253 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AL670379.7-201ENST00000605823 252 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 uc_338.14-201ENST00000613162 166 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AC021755.4-201ENST00000616620 456 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AC002543.1-201ENST00000299783 1954 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.15□□□□□ -2.23
CCDC58Q4VC31 AC110491.1-201ENST00000562191 2010 ntBASIC1.15□□□□□ -2.23
CCDC58Q4VC31 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CCDC58Q4VC31 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 Y_RNA.500-201ENST00000384466 111 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AL590084.1-201ENST00000407885 387 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 RNU6-564P-201ENST00000410983 104 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AL590365.1-201ENST00000450788 243 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AC139453.3-201ENST00000493276 369 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 SNORA31.22-201ENST00000517204 135 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AC090821.2-201ENST00000523552 176 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AC067805.1-201ENST00000559344 470 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AL356432.3-201ENST00000568952 465 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 DUXAP10-204ENST00000612052 616 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 MIR5739-201ENST00000619803 80 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 AC099842.1-201ENST00000619919 596 ntBASIC1.14□□□□□ -2.23
CCDC58Q4VC31 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms