Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.83□□□□□ -1.96
GABPAQ06546 AC121334.2-201ENST00000605387 271 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 AC131902.3-201ENST00000611767 581 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 SNHG22-203ENST00000617833 660 ntBASIC2.83□□□□□ -1.96
GABPAQ06546 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.83□□□□□ -1.96
GABPAQ06546 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.83□□□□□ -1.96
GABPAQ06546 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
GABPAQ06546 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
GABPAQ06546 AC233263.6-201ENST00000631132 1963 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.82□□□□□ -1.96
GABPAQ06546 MED14P1-201ENST00000430517 648 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.82□□□□□ -1.96
GABPAQ06546 AL445567.1-201ENST00000439121 144 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 AC005094.1-201ENST00000440420 368 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.82□□□□□ -1.96
GABPAQ06546 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.82□□□□□ -1.96
GABPAQ06546 AC104389.3-201ENST00000445629 235 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 AC098826.2-201ENST00000452011 651 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.82□□□□□ -1.96
GABPAQ06546 MTCO2P6-201ENST00000463134 685 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.82□□□□□ -1.96
GABPAQ06546 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.82□□□□□ -1.96
GABPAQ06546 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.82□□□□□ -1.96
GABPAQ06546 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.82□□□□□ -1.96
GABPAQ06546 AC021269.2-201ENST00000532318 330 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.82□□□□□ -1.96
GABPAQ06546 ZNF519P3-201ENST00000557158 1032 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 HMGB1P14-201ENST00000557424 591 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.82□□□□□ -1.96
GABPAQ06546 AC135628.1-201ENST00000568867 534 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.82□□□□□ -1.96
GABPAQ06546 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.82□□□□□ -1.96
GABPAQ06546 GLUD1P4-201ENST00000590914 418 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
GABPAQ06546 DPPA3P3-201ENST00000603842 430 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 AC067747.1-201ENST00000608026 250 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 AC108747.1-201ENST00000609508 535 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 AC087241.4-201ENST00000612441 480 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
GABPAQ06546 MIR6733-201ENST00000635723 61 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 LRRC77P-213ENST00000637727 880 ntBASIC2.82□□□□□ -1.96
GABPAQ06546 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.82□□□□□ -1.96
GABPAQ06546 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
GABPAQ06546 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
GABPAQ06546 RNU6-270P-201ENST00000364131 105 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 RNY3P13-201ENST00000365542 102 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 RNU6-741P-201ENST00000383889 107 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.81□□□□□ -1.96
GABPAQ06546 ELOCP17-201ENST00000414751 326 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 Z85995.1-201ENST00000415547 335 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 USP9YP13-201ENST00000417797 480 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 MTND2P18-201ENST00000419962 1030 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.81□□□□□ -1.96
GABPAQ06546 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.81□□□□□ -1.96
GABPAQ06546 AL353777.1-201ENST00000425552 326 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 CETN4P-201ENST00000432407 469 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.81□□□□□ -1.96
GABPAQ06546 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.81□□□□□ -1.96
GABPAQ06546 MTND1P26-201ENST00000440488 538 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 UBE2D3P4-201ENST00000441973 436 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 HIGD1AP2-201ENST00000446367 280 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.81□□□□□ -1.96
GABPAQ06546 GSTA11P-201ENST00000452866 669 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AP000797.1-201ENST00000478870 387 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 MTND5P13-201ENST00000513046 1079 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.81□□□□□ -1.96
GABPAQ06546 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.81□□□□□ -1.96
GABPAQ06546 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
GABPAQ06546 HMGB1P41-201ENST00000520234 440 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AC022616.6-201ENST00000520479 119 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.81□□□□□ -1.96
GABPAQ06546 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.81□□□□□ -1.96
GABPAQ06546 TRAV28-201ENST00000557548 323 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 MIR5697-201ENST00000578045 78 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.81□□□□□ -1.96
GABPAQ06546 MIR4293-201ENST00000584305 78 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.81□□□□□ -1.96
GABPAQ06546 AL022161.1-201ENST00000604390 213 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AL161629.2-201ENST00000615347 275 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 AC068057.2-201ENST00000624047 895 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
GABPAQ06546 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 MTND5P6-201ENST00000422338 1798 ntBASIC2.81□□□□□ -1.96
GABPAQ06546 MAPK10-322ENST00000641485 4530 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
GABPAQ06546 RNY4P16-201ENST00000364768 94 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 RNU5E-5P-201ENST00000365379 116 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
GABPAQ06546 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.8□□□□□ -1.96
GABPAQ06546 RNU6-1035P-201ENST00000384477 107 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 SNORA41-201ENST00000384675 132 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AL359634.1-202ENST00000404721 284 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AL162578.1-201ENST00000406202 378 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 RNU2-62P-201ENST00000410868 191 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AC092047.1-201ENST00000424997 240 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 AC244035.1-201ENST00000430042 390 ntBASIC2.8□□□□□ -1.96
GABPAQ06546 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
GABPAQ06546 AC018634.1-201ENST00000437554 401 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms