Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC090517.1-201ENST00000569307 266 ntBASIC4.26□□□□□ -1.73
YBX1P67809 MIR4277-201ENST00000578298 84 ntBASIC4.26□□□□□ -1.73
YBX1P67809 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
YBX1P67809 OR1M4P-201ENST00000589199 287 ntBASIC4.26□□□□□ -1.73
YBX1P67809 VN1R91P-201ENST00000594377 169 ntBASIC4.26□□□□□ -1.73
YBX1P67809 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.26□□□□□ -1.73
YBX1P67809 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.26□□□□□ -1.73
YBX1P67809 MIR15A-201ENST00000607334 83 ntBASIC4.26□□□□□ -1.73
YBX1P67809 AL450472.3-201ENST00000615578 367 ntBASIC4.26□□□□□ -1.73
YBX1P67809 AL031601.2-202ENST00000622650 282 ntBASIC4.26□□□□□ -1.73
YBX1P67809 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
YBX1P67809 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
YBX1P67809 MAPK10-320ENST00000641462 6696 ntBASIC4.26□□□□□ -1.73
YBX1P67809 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
YBX1P67809 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
YBX1P67809 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
YBX1P67809 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.26□□□□□ -1.73
YBX1P67809 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.26□□□□□ -1.73
YBX1P67809 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
YBX1P67809 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
YBX1P67809 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
YBX1P67809 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
YBX1P67809 AC007390.2-201ENST00000606229 3803 ntBASIC4.25□□□□□ -1.73
YBX1P67809 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
YBX1P67809 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YBX1P67809 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YBX1P67809 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YBX1P67809 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
YBX1P67809 RNU1-108P-201ENST00000362556 161 ntBASIC4.25□□□□□ -1.73
YBX1P67809 RNU6-263P-201ENST00000363811 107 ntBASIC4.25□□□□□ -1.73
YBX1P67809 RNU4-50P-201ENST00000364361 141 ntBASIC4.25□□□□□ -1.73
YBX1P67809 MIR625-201ENST00000385047 85 ntBASIC4.25□□□□□ -1.73
YBX1P67809 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
YBX1P67809 AL030996.1-201ENST00000411430 235 ntBASIC4.25□□□□□ -1.73
YBX1P67809 AL160275.2-201ENST00000412010 394 ntBASIC4.25□□□□□ -1.73
YBX1P67809 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.25□□□□□ -1.73
YBX1P67809 RPS15AP6-201ENST00000420703 385 ntBASIC4.25□□□□□ -1.73
YBX1P67809 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.25□□□□□ -1.73
YBX1P67809 AC139712.2-201ENST00000424302 339 ntBASIC4.25□□□□□ -1.73
YBX1P67809 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
YBX1P67809 RPS27AP12-201ENST00000429552 465 ntBASIC4.25□□□□□ -1.73
YBX1P67809 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.25□□□□□ -1.73
YBX1P67809 RPL23AP65-201ENST00000475608 468 ntBASIC4.25□□□□□ -1.73
YBX1P67809 AC012158.1-204ENST00000483430 465 ntBASIC4.25□□□□□ -1.73
YBX1P67809 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.25□□□□□ -1.73
YBX1P67809 ACA59.1-201ENST00000515966 143 ntBASIC4.25□□□□□ -1.73
YBX1P67809 RNU6-182P-201ENST00000516970 105 ntBASIC4.25□□□□□ -1.73
YBX1P67809 RNU6-111P-201ENST00000517179 105 ntBASIC4.25□□□□□ -1.73
YBX1P67809 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.25□□□□□ -1.73
YBX1P67809 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
YBX1P67809 TRAV8-5-201ENST00000537369 341 ntBASIC4.25□□□□□ -1.73
YBX1P67809 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.25□□□□□ -1.73
YBX1P67809 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.25□□□□□ -1.73
YBX1P67809 OR4H12P-201ENST00000556269 907 ntBASIC4.25□□□□□ -1.73
YBX1P67809 AL356489.2-201ENST00000566968 3528 ntBASIC4.25□□□□□ -1.73
YBX1P67809 HMGB2P1-201ENST00000591146 634 ntBASIC4.25□□□□□ -1.73
YBX1P67809 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.25□□□□□ -1.73
YBX1P67809 MIR92B-201ENST00000607575 96 ntBASIC4.25□□□□□ -1.73
YBX1P67809 AL591516.1-201ENST00000611326 274 ntBASIC4.25□□□□□ -1.73
YBX1P67809 AC064801.1-201ENST00000612025 407 ntBASIC4.25□□□□□ -1.73
YBX1P67809 SDR42E1P2-201ENST00000614861 481 ntBASIC4.25□□□□□ -1.73
YBX1P67809 AC099669.2-201ENST00000616549 437 ntBASIC4.25□□□□□ -1.73
YBX1P67809 U73479.1-201ENST00000618062 168 ntBASIC4.25□□□□□ -1.73
YBX1P67809 SDR42E1P4-201ENST00000620894 481 ntBASIC4.25□□□□□ -1.73
YBX1P67809 AC130454.1-201ENST00000622948 401 ntBASIC4.25□□□□□ -1.73
YBX1P67809 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.25□□□□□ -1.73
YBX1P67809 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.25□□□□□ -1.73
YBX1P67809 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
YBX1P67809 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
YBX1P67809 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
YBX1P67809 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
YBX1P67809 AL136964.1-201ENST00000622038 2990 ntBASIC4.24□□□□□ -1.73
YBX1P67809 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
YBX1P67809 MIR513A2-201ENST00000385249 127 ntBASIC4.24□□□□□ -1.73
YBX1P67809 RNU4-78P-201ENST00000410940 126 ntBASIC4.24□□□□□ -1.73
YBX1P67809 AL590135.1-201ENST00000422215 156 ntBASIC4.24□□□□□ -1.73
YBX1P67809 PIGPP3-201ENST00000425307 415 ntBASIC4.24□□□□□ -1.73
YBX1P67809 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.24□□□□□ -1.73
YBX1P67809 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.24□□□□□ -1.73
YBX1P67809 DAP3P1-201ENST00000441522 278 ntBASIC4.24□□□□□ -1.73
YBX1P67809 AC011276.1-201ENST00000469688 323 ntBASIC4.24□□□□□ -1.73
YBX1P67809 RPS26P28-201ENST00000470806 348 ntBASIC4.24□□□□□ -1.73
YBX1P67809 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.24□□□□□ -1.73
YBX1P67809 MTND3P25-201ENST00000509243 135 ntBASIC4.24□□□□□ -1.73
YBX1P67809 PPBPP1-201ENST00000510807 373 ntBASIC4.24□□□□□ -1.73
YBX1P67809 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.24□□□□□ -1.73
YBX1P67809 Y_RNA.687-201ENST00000516558 91 ntBASIC4.24□□□□□ -1.73
YBX1P67809 RNU6-897P-201ENST00000517135 105 ntBASIC4.24□□□□□ -1.73
YBX1P67809 AC144568.1-201ENST00000520139 137 ntBASIC4.24□□□□□ -1.73
YBX1P67809 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.24□□□□□ -1.73
YBX1P67809 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.24□□□□□ -1.73
YBX1P67809 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.24□□□□□ -1.73
YBX1P67809 RPS29P30-201ENST00000600975 111 ntBASIC4.24□□□□□ -1.73
YBX1P67809 RNA5SP108-201ENST00000605921 117 ntBASIC4.24□□□□□ -1.73
YBX1P67809 MIR1244-1-201ENST00000612829 85 ntBASIC4.24□□□□□ -1.73
YBX1P67809 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
YBX1P67809 AL138721.1-201ENST00000616756 179 ntBASIC4.24□□□□□ -1.73
YBX1P67809 AC011944.2-201ENST00000624440 683 ntBASIC4.24□□□□□ -1.73
YBX1P67809 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.24□□□□□ -1.73
YBX1P67809 MIR1244-3-201ENST00000635744 85 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms