Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC107294.1-201ENST00000609524 467 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN20P56880 uc_338.11-201ENST00000619132 160 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN20P56880 MIR1321-201ENST00000637766 79 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN20P56880 AC007785.2-201ENST00000598627 1916 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN20P56880 AL049781.1-201ENST00000623195 3585 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN20P56880 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN20P56880 SNORD46.1-201ENST00000364139 104 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 RNA5SP72-201ENST00000364442 117 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 RNU6-483P-201ENST00000384088 108 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 RNVU1-14-201ENST00000384770 164 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 MIR34B-201ENST00000385076 84 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 SNORD115-47-201ENST00000391226 86 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN20P56880 RNU2-33P-201ENST00000410344 192 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 NDUFB4P5-201ENST00000415445 361 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN20P56880 TMEM167AP1-201ENST00000423409 219 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.06□□□□□ -1.92
CLDN20P56880 AC016691.1-201ENST00000441321 413 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN20P56880 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN20P56880 FGF7P6-202ENST00000451282 293 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 FABP5P13-201ENST00000452144 328 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN20P56880 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN20P56880 RPS29P15-201ENST00000458329 171 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.06□□□□□ -1.92
CLDN20P56880 RPL39P36-201ENST00000490784 156 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AL160314.1-201ENST00000490836 438 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN20P56880 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CLDN20P56880 Y_RNA.704-201ENST00000516851 102 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN20P56880 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.06□□□□□ -1.92
CLDN20P56880 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.06□□□□□ -1.92
CLDN20P56880 ADI1P3-201ENST00000549509 470 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AC011611.1-201ENST00000552179 197 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN20P56880 TRAV28-201ENST00000557548 323 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AC034105.3-201ENST00000565294 442 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.06□□□□□ -1.92
CLDN20P56880 AC006557.5-201ENST00000603126 811 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AC012468.1-201ENST00000604888 430 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AC009570.1-201ENST00000609599 745 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AC068944.2-201ENST00000610373 403 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AC012409.4-201ENST00000612923 249 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AL359547.2-201ENST00000615810 418 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 AC011155.2-201ENST00000623202 216 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 MTND1P37-201ENST00000636562 264 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 MIR3688-2-201ENST00000636963 87 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN20P56880 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CLDN20P56880 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN20P56880 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CLDN20P56880 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CLDN20P56880 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN20P56880 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN20P56880 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN20P56880 AC007256.1-201ENST00000392253 2765 ntBASIC3.06□□□□□ -1.92
CLDN20P56880 CUL1P1-201ENST00000509510 2425 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN20P56880 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN20P56880 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN20P56880 UBE2L2-201ENST00000254302 429 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN20P56880 RNU6-1167P-201ENST00000363227 94 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 RNU6-288P-201ENST00000363690 104 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 SNORD115-7-201ENST00000365306 82 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 RNU6-996P-201ENST00000365438 107 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 Y_RNA.381-201ENST00000365666 102 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 RNU6-1029P-201ENST00000384109 107 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AL591416.1-201ENST00000404015 867 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 RN7SKP111-201ENST00000410349 271 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 RPS12P24-201ENST00000412619 387 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 Z99755.1-201ENST00000414048 380 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN20P56880 USP9YP27-201ENST00000418455 438 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 BTF3L4P3-201ENST00000418879 476 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN20P56880 MTCYBP5-201ENST00000423752 1135 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 ELOCP14-201ENST00000428070 331 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AC007919.1-201ENST00000429380 217 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.05□□□□□ -1.92
CLDN20P56880 AL591212.2-201ENST00000433923 257 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AC005019.1-201ENST00000436455 431 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN20P56880 ELOCP7-201ENST00000439968 331 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 Z82210.1-201ENST00000440037 231 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 MTND4P25-201ENST00000441039 533 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN20P56880 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.05□□□□□ -1.92
CLDN20P56880 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms