Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SNORA70.4-201ENST00000365509 134 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 MIR196B-201ENST00000384852 84 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 RNA5SP184-201ENST00000411071 108 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 RPL17P12-201ENST00000413391 526 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX1P55347 BPY2DP-201ENST00000422208 265 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 COTL1P1-201ENST00000422309 375 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX1P55347 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX1P55347 AC011753.1-201ENST00000451001 220 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.31□□□□□ -2.04
PKNOX1P55347 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.31□□□□□ -2.04
PKNOX1P55347 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
PKNOX1P55347 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.31□□□□□ -2.04
PKNOX1P55347 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 SCARNA11.3-201ENST00000517276 130 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.31□□□□□ -2.04
PKNOX1P55347 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX1P55347 ISCA1P3-201ENST00000577104 373 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.31□□□□□ -2.04
PKNOX1P55347 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.31□□□□□ -2.04
PKNOX1P55347 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.31□□□□□ -2.04
PKNOX1P55347 AC234772.3-201ENST00000602277 528 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 AP000403.1-201ENST00000603349 851 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 AL033523.1-201ENST00000605153 153 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 AC135507.1-201ENST00000607214 561 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 AP000240.1-201ENST00000609910 452 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 AC103710.1-201ENST00000610003 901 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 MIR7106-201ENST00000612419 65 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.31□□□□□ -2.04
PKNOX1P55347 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PKNOX1P55347 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.31□□□□□ -2.04
PKNOX1P55347 AC007336.1-201ENST00000576365 3828 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.31□□□□□ -2.04
PKNOX1P55347 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
PKNOX1P55347 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PKNOX1P55347 RNU6-1284P-201ENST00000363701 100 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.3□□□□□ -2.04
PKNOX1P55347 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.3□□□□□ -2.04
PKNOX1P55347 RPS20P2-201ENST00000402520 389 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 SNORA11-201ENST00000408789 128 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.3□□□□□ -2.04
PKNOX1P55347 RPL23AP39-201ENST00000415533 405 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.3□□□□□ -2.04
PKNOX1P55347 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PKNOX1P55347 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.3□□□□□ -2.04
PKNOX1P55347 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.3□□□□□ -2.04
PKNOX1P55347 AL831737.1-201ENST00000441288 271 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AC025750.2-201ENST00000442609 450 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.3□□□□□ -2.04
PKNOX1P55347 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PKNOX1P55347 AC108059.3-201ENST00000456388 214 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PKNOX1P55347 HMGB3P3-201ENST00000510526 400 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.3□□□□□ -2.04
PKNOX1P55347 SNORA31.18-201ENST00000517043 134 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 RNU6-1003P-201ENST00000517099 105 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AC109329.2-201ENST00000519658 482 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.3□□□□□ -2.04
PKNOX1P55347 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.3□□□□□ -2.04
PKNOX1P55347 COX6CP5-201ENST00000527162 228 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AP003461.1-201ENST00000528866 78 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.3□□□□□ -2.04
PKNOX1P55347 AC123904.2-201ENST00000548059 300 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.3□□□□□ -2.04
PKNOX1P55347 AC105137.2-201ENST00000569073 466 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.3□□□□□ -2.04
PKNOX1P55347 MIR4319-201ENST00000577285 85 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.3□□□□□ -2.04
PKNOX1P55347 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.3□□□□□ -2.04
PKNOX1P55347 AC008751.2-201ENST00000597885 980 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AC068057.2-201ENST00000624047 895 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AC092192.1-201ENST00000633154 1018 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 AC007671.2-201ENST00000637344 619 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PKNOX1P55347 ELF2P3-201ENST00000445099 1506 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PKNOX1P55347 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PKNOX1P55347 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PKNOX1P55347 AC080100.1-201ENST00000624239 5356 ntBASIC2.3□□□□□ -2.04
PKNOX1P55347 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
PKNOX1P55347 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PKNOX1P55347 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PKNOX1P55347 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
PKNOX1P55347 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PKNOX1P55347 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PKNOX1P55347 RNY4P24-201ENST00000362735 96 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 RNA5SP387-201ENST00000364226 106 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 Y_RNA.333-201ENST00000365274 102 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
PKNOX1P55347 RNU6-14P-201ENST00000384630 106 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 NDUFS5P1-201ENST00000405668 289 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 AC096664.2-201ENST00000411843 406 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 ZNF90P2-204ENST00000419323 1075 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 MTND2P9-201ENST00000422293 931 ntBASIC2.29□□□□□ -2.04
PKNOX1P55347 NUP35P1-201ENST00000422734 947 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms