Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL136313.1-201ENST00000624804 202 ntBASIC2.41□□□□□ -2.02
LIM2P55344 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.41□□□□□ -2.02
LIM2P55344 AC110079.1-202ENST00000635213 138 ntBASIC2.41□□□□□ -2.02
LIM2P55344 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LIM2P55344 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
LIM2P55344 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
LIM2P55344 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
LIM2P55344 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.4□□□□□ -2.02
LIM2P55344 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
LIM2P55344 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
LIM2P55344 NDUFS5P1-201ENST00000405668 289 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC080125.1-201ENST00000414888 684 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.4□□□□□ -2.03
LIM2P55344 RAC1P6-201ENST00000423911 575 ntBASIC2.4□□□□□ -2.03
LIM2P55344 ISCA1P1-201ENST00000426679 387 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC137499.1-201ENST00000427602 88 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.4□□□□□ -2.03
LIM2P55344 FCF1P1-201ENST00000432690 571 ntBASIC2.4□□□□□ -2.03
LIM2P55344 MTND1P28-201ENST00000435623 950 ntBASIC2.4□□□□□ -2.03
LIM2P55344 SNRPEP9-201ENST00000436794 238 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.4□□□□□ -2.03
LIM2P55344 MTATP6P30-201ENST00000443540 664 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.4□□□□□ -2.03
LIM2P55344 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.4□□□□□ -2.03
LIM2P55344 RAC1P5-201ENST00000512182 576 ntBASIC2.4□□□□□ -2.03
LIM2P55344 FABP5P5-201ENST00000515537 406 ntBASIC2.4□□□□□ -2.03
LIM2P55344 RN7SKP282-201ENST00000516824 299 ntBASIC2.4□□□□□ -2.03
LIM2P55344 HMGB1P41-201ENST00000520234 440 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC022634.1-201ENST00000520765 532 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC107934.1-201ENST00000522215 217 ntBASIC2.4□□□□□ -2.03
LIM2P55344 CKS1BP7-201ENST00000522230 235 ntBASIC2.4□□□□□ -2.03
LIM2P55344 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.4□□□□□ -2.03
LIM2P55344 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.4□□□□□ -2.03
LIM2P55344 AL157394.1-201ENST00000562983 1224 ntBASIC2.4□□□□□ -2.03
LIM2P55344 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC174048.1-201ENST00000603389 144 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC112191.3-201ENST00000604371 277 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AL161798.1-201ENST00000604630 131 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AL031775.1-201ENST00000607014 887 ntBASIC2.4□□□□□ -2.03
LIM2P55344 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.4□□□□□ -2.03
LIM2P55344 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LIM2P55344 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.4□□□□□ -2.03
LIM2P55344 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.4□□□□□ -2.03
LIM2P55344 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
LIM2P55344 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
LIM2P55344 MAPK10-266ENST00000641066 6555 ntBASIC2.39□□□□□ -2.03
LIM2P55344 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
LIM2P55344 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.39□□□□□ -2.03
LIM2P55344 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LIM2P55344 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.39□□□□□ -2.03
LIM2P55344 HSPE1P11-201ENST00000339579 310 ntBASIC2.39□□□□□ -2.03
LIM2P55344 RNU5F-7P-201ENST00000363696 115 ntBASIC2.39□□□□□ -2.03
LIM2P55344 RNU4-91P-201ENST00000364778 135 ntBASIC2.39□□□□□ -2.03
LIM2P55344 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.39□□□□□ -2.03
LIM2P55344 DEFA7P-201ENST00000382676 285 ntBASIC2.39□□□□□ -2.03
LIM2P55344 Y_RNA.510-201ENST00000384511 114 ntBASIC2.39□□□□□ -2.03
LIM2P55344 MIR27B-201ENST00000385129 97 ntBASIC2.39□□□□□ -2.03
LIM2P55344 RPL17P50-201ENST00000396131 546 ntBASIC2.39□□□□□ -2.03
LIM2P55344 RNU2-8P-201ENST00000410727 190 ntBASIC2.39□□□□□ -2.03
LIM2P55344 NDUFS5P4-201ENST00000412983 318 ntBASIC2.39□□□□□ -2.03
LIM2P55344 SEPT2P1-201ENST00000419651 180 ntBASIC2.39□□□□□ -2.03
LIM2P55344 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.39□□□□□ -2.03
LIM2P55344 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.39□□□□□ -2.03
LIM2P55344 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.39□□□□□ -2.03
LIM2P55344 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.39□□□□□ -2.03
LIM2P55344 USP9YP12-201ENST00000450481 570 ntBASIC2.39□□□□□ -2.03
LIM2P55344 FABP5P15-201ENST00000453566 214 ntBASIC2.39□□□□□ -2.03
LIM2P55344 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.39□□□□□ -2.03
LIM2P55344 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.39□□□□□ -2.03
LIM2P55344 AP003467.2-201ENST00000520175 319 ntBASIC2.39□□□□□ -2.03
LIM2P55344 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.39□□□□□ -2.03
LIM2P55344 AP006587.4-201ENST00000526053 529 ntBASIC2.39□□□□□ -2.03
LIM2P55344 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.39□□□□□ -2.03
LIM2P55344 MIR3118-1-201ENST00000581787 76 ntBASIC2.39□□□□□ -2.03
LIM2P55344 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.39□□□□□ -2.03
LIM2P55344 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.39□□□□□ -2.03
LIM2P55344 AL355598.1-201ENST00000604169 202 ntBASIC2.39□□□□□ -2.03
LIM2P55344 AC103710.2-201ENST00000609912 942 ntBASIC2.39□□□□□ -2.03
LIM2P55344 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LIM2P55344 AC108479.2-201ENST00000617314 601 ntBASIC2.39□□□□□ -2.03
LIM2P55344 AC090617.7-201ENST00000623952 126 ntBASIC2.39□□□□□ -2.03
LIM2P55344 AC091953.2-201ENST00000623979 160 ntBASIC2.39□□□□□ -2.03
LIM2P55344 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.39□□□□□ -2.03
LIM2P55344 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LIM2P55344 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.39□□□□□ -2.03
LIM2P55344 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
LIM2P55344 AC138915.1-201ENST00000565427 1685 ntBASIC2.38□□□□□ -2.03
LIM2P55344 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LIM2P55344 RNA5SP68-201ENST00000363885 119 ntBASIC2.38□□□□□ -2.03
LIM2P55344 Y_RNA.560-201ENST00000384689 102 ntBASIC2.38□□□□□ -2.03
LIM2P55344 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LIM2P55344 AL021407.1-201ENST00000404531 386 ntBASIC2.38□□□□□ -2.03
LIM2P55344 FCF1P10-201ENST00000407590 479 ntBASIC2.38□□□□□ -2.03
LIM2P55344 RPL26P27-201ENST00000414397 437 ntBASIC2.38□□□□□ -2.03
LIM2P55344 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.38□□□□□ -2.03
LIM2P55344 AC104651.1-201ENST00000427559 735 ntBASIC2.38□□□□□ -2.03
LIM2P55344 HMGB3P12-201ENST00000438745 556 ntBASIC2.38□□□□□ -2.03
LIM2P55344 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.38□□□□□ -2.03
LIM2P55344 EPS15P1-201ENST00000448836 336 ntBASIC2.38□□□□□ -2.03
LIM2P55344 KATNBL1P6-201ENST00000453433 915 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms