Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC005951.1-201ENST00000576706 485 ntBASIC2.97□□□□□ -1.93
CDH13P55290 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.97□□□□□ -1.93
CDH13P55290 AC098848.2-201ENST00000588023 330 ntBASIC2.97□□□□□ -1.93
CDH13P55290 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH13P55290 AC022893.3-201ENST00000607665 437 ntBASIC2.97□□□□□ -1.93
CDH13P55290 AC007318.2-201ENST00000620999 243 ntBASIC2.97□□□□□ -1.93
CDH13P55290 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDH13P55290 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDH13P55290 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDH13P55290 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
CDH13P55290 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.96□□□□□ -1.93
CDH13P55290 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH13P55290 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH13P55290 RNU6-884P-201ENST00000363889 107 ntBASIC2.96□□□□□ -1.94
CDH13P55290 RNU4-24P-201ENST00000364565 139 ntBASIC2.96□□□□□ -1.94
CDH13P55290 Y_RNA.359-201ENST00000365498 102 ntBASIC2.96□□□□□ -1.94
CDH13P55290 CD24P4-201ENST00000382840 243 ntBASIC2.96□□□□□ -1.94
CDH13P55290 RNU6-1027P-201ENST00000383998 107 ntBASIC2.96□□□□□ -1.94
CDH13P55290 MIR301A-201ENST00000385261 86 ntBASIC2.96□□□□□ -1.94
CDH13P55290 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AL663109.1-201ENST00000411498 844 ntBASIC2.96□□□□□ -1.94
CDH13P55290 NDUFS5P4-201ENST00000412983 318 ntBASIC2.96□□□□□ -1.94
CDH13P55290 RPL26P27-201ENST00000414397 437 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AC080125.1-201ENST00000414888 684 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH13P55290 HMGN2P30-201ENST00000423237 256 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH13P55290 HMGB1P9-201ENST00000429856 646 ntBASIC2.96□□□□□ -1.94
CDH13P55290 RPL23AP30-201ENST00000432419 501 ntBASIC2.96□□□□□ -1.94
CDH13P55290 RPL36AP53-201ENST00000432891 316 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AC109925.1-201ENST00000478069 331 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH13P55290 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CDH13P55290 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH13P55290 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH13P55290 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH13P55290 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH13P55290 MTCO3P24-201ENST00000572729 782 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH13P55290 AC024619.4-201ENST00000580924 316 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AC073648.5-201ENST00000603502 305 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AL355598.1-201ENST00000604169 202 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AC012468.1-201ENST00000604888 430 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AL139286.2-201ENST00000606838 396 ntBASIC2.96□□□□□ -1.94
CDH13P55290 MIR92B-201ENST00000607575 96 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AC004832.5-201ENST00000608677 401 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AC008498.1-201ENST00000613012 531 ntBASIC2.96□□□□□ -1.94
CDH13P55290 AL359547.2-201ENST00000615810 418 ntBASIC2.96□□□□□ -1.94
CDH13P55290 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH13P55290 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH13P55290 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH13P55290 MTND5P17-201ENST00000418405 1603 ntBASIC2.95□□□□□ -1.94
CDH13P55290 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDH13P55290 AC073325.2-201ENST00000339545 159 ntBASIC2.95□□□□□ -1.94
CDH13P55290 SNORA71.3-201ENST00000362582 128 ntBASIC2.95□□□□□ -1.94
CDH13P55290 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.95□□□□□ -1.94
CDH13P55290 Y_RNA.582-201ENST00000391023 95 ntBASIC2.95□□□□□ -1.94
CDH13P55290 SAR1AP2-201ENST00000392696 594 ntBASIC2.95□□□□□ -1.94
CDH13P55290 RPL5P18-201ENST00000406671 891 ntBASIC2.95□□□□□ -1.94
CDH13P55290 RNA5SP344-201ENST00000411081 104 ntBASIC2.95□□□□□ -1.94
CDH13P55290 RNU6-387P-201ENST00000411331 105 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH13P55290 AC093151.1-201ENST00000427711 313 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AC005326.1-201ENST00000429197 123 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AL592045.1-201ENST00000429867 352 ntBASIC2.95□□□□□ -1.94
CDH13P55290 CYCSP32-201ENST00000440548 321 ntBASIC2.95□□□□□ -1.94
CDH13P55290 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH13P55290 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH13P55290 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH13P55290 MTCYBP1-201ENST00000454315 1119 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.95□□□□□ -1.94
CDH13P55290 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AC022364.2-201ENST00000457963 554 ntBASIC2.95□□□□□ -1.94
CDH13P55290 MRPS17P3-201ENST00000465453 385 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AC233702.1-201ENST00000482905 502 ntBASIC2.95□□□□□ -1.94
CDH13P55290 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.95□□□□□ -1.94
CDH13P55290 AC105252.1-201ENST00000503089 286 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AC116562.3-201ENST00000506136 177 ntBASIC2.95□□□□□ -1.94
CDH13P55290 MTCO3P7-201ENST00000510008 774 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH13P55290 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH13P55290 AC068587.5-201ENST00000528506 175 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AC087683.1-201ENST00000591187 441 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AC078899.3-201ENST00000599065 212 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AC098614.4-201ENST00000607601 462 ntBASIC2.95□□□□□ -1.94
CDH13P55290 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CDH13P55290 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CDH13P55290 MIR7975-201ENST00000619350 68 ntBASIC2.95□□□□□ -1.94
CDH13P55290 AL355596.1-201ENST00000565399 3996 ntBASIC2.95□□□□□ -1.94
CDH13P55290 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDH13P55290 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH13P55290 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDH13P55290 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH13P55290 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
CDH13P55290 AC103710.2-202ENST00000641454 2853 ntBASIC2.94□□□□□ -1.94
CDH13P55290 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH13P55290 RNU6-181P-201ENST00000363225 107 ntBASIC2.94□□□□□ -1.94
CDH13P55290 RNU6-778P-201ENST00000363269 103 ntBASIC2.94□□□□□ -1.94
CDH13P55290 RNU1-105P-201ENST00000363470 161 ntBASIC2.94□□□□□ -1.94
CDH13P55290 Y_RNA.194-201ENST00000363985 102 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms