Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NDUFB4P6-201ENST00000436819 366 ntBASIC2.95□□□□□ -1.94
CDH11P55287 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH11P55287 RPL23AP20-201ENST00000447965 421 ntBASIC2.95□□□□□ -1.94
CDH11P55287 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDH11P55287 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH11P55287 RPS20P22-201ENST00000473700 357 ntBASIC2.95□□□□□ -1.94
CDH11P55287 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH11P55287 MTND4LP22-201ENST00000508209 276 ntBASIC2.95□□□□□ -1.94
CDH11P55287 TTC39CP1-201ENST00000512513 755 ntBASIC2.95□□□□□ -1.94
CDH11P55287 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH11P55287 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH11P55287 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH11P55287 RNA5SP385-201ENST00000515947 110 ntBASIC2.95□□□□□ -1.94
CDH11P55287 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH11P55287 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.95□□□□□ -1.94
CDH11P55287 OR5BN1P-201ENST00000532955 829 ntBASIC2.95□□□□□ -1.94
CDH11P55287 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH11P55287 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.95□□□□□ -1.94
CDH11P55287 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH11P55287 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH11P55287 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH11P55287 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH11P55287 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH11P55287 Z84480.1-201ENST00000605131 311 ntBASIC2.95□□□□□ -1.94
CDH11P55287 AL160281.1-201ENST00000605307 311 ntBASIC2.95□□□□□ -1.94
CDH11P55287 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH11P55287 AL365204.3-201ENST00000612448 685 ntBASIC2.95□□□□□ -1.94
CDH11P55287 AC092794.1-201ENST00000612734 582 ntBASIC2.95□□□□□ -1.94
CDH11P55287 AC007998.5-201ENST00000622938 237 ntBASIC2.95□□□□□ -1.94
CDH11P55287 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.95□□□□□ -1.94
CDH11P55287 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
CDH11P55287 AC090740.1-201ENST00000623193 2262 ntBASIC2.95□□□□□ -1.94
CDH11P55287 ZNF680P1-201ENST00000436625 1469 ntBASIC2.95□□□□□ -1.94
CDH11P55287 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH11P55287 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH11P55287 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CDH11P55287 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH11P55287 MTND5P17-201ENST00000418405 1603 ntBASIC2.94□□□□□ -1.94
CDH11P55287 ZNF807-201ENST00000328088 1707 ntBASIC2.94□□□□□ -1.94
CDH11P55287 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH11P55287 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH11P55287 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH11P55287 RNU6-61P-201ENST00000365528 109 ntBASIC2.94□□□□□ -1.94
CDH11P55287 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH11P55287 SNORA24.1-201ENST00000384401 135 ntBASIC2.94□□□□□ -1.94
CDH11P55287 RNU6-606P-201ENST00000384721 111 ntBASIC2.94□□□□□ -1.94
CDH11P55287 MIR454-201ENST00000390180 115 ntBASIC2.94□□□□□ -1.94
CDH11P55287 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CDH11P55287 RNU6-1158P-201ENST00000391167 107 ntBASIC2.94□□□□□ -1.94
CDH11P55287 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH11P55287 AC012498.1-201ENST00000424037 437 ntBASIC2.94□□□□□ -1.94
CDH11P55287 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.94□□□□□ -1.94
CDH11P55287 RPL7L1P10-201ENST00000427790 463 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC005300.1-201ENST00000428401 373 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.94□□□□□ -1.94
CDH11P55287 CBWD4P-201ENST00000445695 655 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH11P55287 MTND2P24-201ENST00000453434 806 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC087588.1-201ENST00000462203 316 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH11P55287 MRPS17P3-201ENST00000465453 385 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC079382.1-201ENST00000493346 557 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC116562.3-201ENST00000506136 177 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC117522.1-201ENST00000509821 380 ntBASIC2.94□□□□□ -1.94
CDH11P55287 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.94□□□□□ -1.94
CDH11P55287 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH11P55287 RNU1-61P-201ENST00000516107 151 ntBASIC2.94□□□□□ -1.94
CDH11P55287 RNU6-314P-201ENST00000516574 104 ntBASIC2.94□□□□□ -1.94
CDH11P55287 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH11P55287 IGKV2-26-201ENST00000518305 343 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH11P55287 OR5G4P-201ENST00000525251 760 ntBASIC2.94□□□□□ -1.94
CDH11P55287 CASP1P1-201ENST00000526345 212 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC068587.5-201ENST00000528506 175 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC104383.1-201ENST00000530297 370 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC136619.2-201ENST00000563361 631 ntBASIC2.94□□□□□ -1.94
CDH11P55287 MIR4775-201ENST00000581168 75 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC034102.8-201ENST00000615146 484 ntBASIC2.94□□□□□ -1.94
CDH11P55287 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH11P55287 SEPT14P19-203ENST00000633205 211 ntBASIC2.94□□□□□ -1.94
CDH11P55287 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH11P55287 Z83843.1-201ENST00000604070 3685 ntBASIC2.94□□□□□ -1.94
CDH11P55287 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
CDH11P55287 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH11P55287 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CDH11P55287 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH11P55287 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 API5P2-201ENST00000397055 1498 ntBASIC2.93□□□□□ -1.94
CDH11P55287 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CDH11P55287 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 Y_RNA.372-201ENST00000365599 102 ntBASIC2.93□□□□□ -1.94
CDH11P55287 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 RPL21P3-201ENST00000395517 478 ntBASIC2.93□□□□□ -1.94
CDH11P55287 RNU6-648P-201ENST00000410190 107 ntBASIC2.93□□□□□ -1.94
CDH11P55287 RNA5SP229-201ENST00000410809 99 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms