Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH4P55283 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH4P55283 MTCO2P20-201ENST00000437339 673 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AC018634.1-201ENST00000437554 401 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH4P55283 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.34□□□□□ -2.03
CDH4P55283 AC098831.1-201ENST00000440661 216 ntBASIC2.34□□□□□ -2.03
CDH4P55283 MTND3P1-201ENST00000441336 220 ntBASIC2.34□□□□□ -2.03
CDH4P55283 FAM103A2P-201ENST00000444122 354 ntBASIC2.34□□□□□ -2.03
CDH4P55283 COX6CP12-201ENST00000446748 202 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH4P55283 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH4P55283 RNU7-59P-201ENST00000459101 61 ntBASIC2.34□□□□□ -2.03
CDH4P55283 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH4P55283 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH4P55283 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.34□□□□□ -2.03
CDH4P55283 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH4P55283 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.34□□□□□ -2.03
CDH4P55283 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH4P55283 NACAP3-201ENST00000552100 481 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AC091544.4-201ENST00000555268 342 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDH4P55283 AC007151.1-201ENST00000572774 483 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH4P55283 MIR3199-1-201ENST00000582434 88 ntBASIC2.34□□□□□ -2.03
CDH4P55283 RPP40P2-201ENST00000603596 712 ntBASIC2.34□□□□□ -2.03
CDH4P55283 RNU6-88P-201ENST00000606801 100 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AC007349.4-201ENST00000608114 532 ntBASIC2.34□□□□□ -2.03
CDH4P55283 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH4P55283 AL589743.7-201ENST00000612637 233 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AL136981.2-201ENST00000617319 734 ntBASIC2.34□□□□□ -2.03
CDH4P55283 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.34□□□□□ -2.03
CDH4P55283 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH4P55283 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH4P55283 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
CDH4P55283 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDH4P55283 AC010329.5-201ENST00000623497 2174 ntBASIC2.34□□□□□ -2.04
CDH4P55283 AC092125.1-201ENST00000562568 1995 ntBASIC2.34□□□□□ -2.04
CDH4P55283 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH4P55283 RNU6-778P-201ENST00000363269 103 ntBASIC2.33□□□□□ -2.04
CDH4P55283 RNU4-92P-201ENST00000363783 136 ntBASIC2.33□□□□□ -2.04
CDH4P55283 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
CDH4P55283 RNU6-636P-201ENST00000384598 107 ntBASIC2.33□□□□□ -2.04
CDH4P55283 MIR218-1-201ENST00000384999 110 ntBASIC2.33□□□□□ -2.04
CDH4P55283 RNU6-220P-201ENST00000390919 107 ntBASIC2.33□□□□□ -2.04
CDH4P55283 AC119751.3-201ENST00000399720 670 ntBASIC2.33□□□□□ -2.04
CDH4P55283 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH4P55283 AC106883.1-201ENST00000418805 562 ntBASIC2.33□□□□□ -2.04
CDH4P55283 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.33□□□□□ -2.04
CDH4P55283 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDH4P55283 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH4P55283 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH4P55283 AC008549.1-201ENST00000512900 643 ntBASIC2.33□□□□□ -2.04
CDH4P55283 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
CDH4P55283 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH4P55283 AC121758.2-201ENST00000553271 193 ntBASIC2.33□□□□□ -2.04
CDH4P55283 AC135628.1-201ENST00000568867 534 ntBASIC2.33□□□□□ -2.04
CDH4P55283 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH4P55283 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH4P55283 AC098826.3-201ENST00000603823 466 ntBASIC2.33□□□□□ -2.04
CDH4P55283 AL161798.1-201ENST00000604630 131 ntBASIC2.33□□□□□ -2.04
CDH4P55283 AL158042.1-201ENST00000605338 460 ntBASIC2.33□□□□□ -2.04
CDH4P55283 AC103710.1-201ENST00000610003 901 ntBASIC2.33□□□□□ -2.04
CDH4P55283 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDH4P55283 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH4P55283 AP002791.1-201ENST00000623291 381 ntBASIC2.33□□□□□ -2.04
CDH4P55283 AL356596.1-201ENST00000624230 379 ntBASIC2.33□□□□□ -2.04
CDH4P55283 U2.21-201ENST00000637295 81 ntBASIC2.33□□□□□ -2.04
CDH4P55283 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH4P55283 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH4P55283 ADAM3A-203ENST00000461344 2157 ntBASIC2.32□□□□□ -2.04
CDH4P55283 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH4P55283 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH4P55283 RNU1-91P-201ENST00000364746 163 ntBASIC2.32□□□□□ -2.04
CDH4P55283 RNU6-301P-201ENST00000384277 107 ntBASIC2.32□□□□□ -2.04
CDH4P55283 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
CDH4P55283 SNORA3.2-201ENST00000408221 125 ntBASIC2.32□□□□□ -2.04
CDH4P55283 SNORA11.2-201ENST00000408318 127 ntBASIC2.32□□□□□ -2.04
CDH4P55283 RPL26P27-201ENST00000414397 437 ntBASIC2.32□□□□□ -2.04
CDH4P55283 Z98742.3-201ENST00000418637 326 ntBASIC2.32□□□□□ -2.04
CDH4P55283 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH4P55283 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH4P55283 GPM6BP2-201ENST00000432046 144 ntBASIC2.32□□□□□ -2.04
CDH4P55283 RPL36AP53-201ENST00000432891 316 ntBASIC2.32□□□□□ -2.04
CDH4P55283 USP9YP24-201ENST00000434374 697 ntBASIC2.32□□□□□ -2.04
CDH4P55283 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH4P55283 USP9YP17-201ENST00000444617 696 ntBASIC2.32□□□□□ -2.04
CDH4P55283 GPM6BP1-201ENST00000446387 144 ntBASIC2.32□□□□□ -2.04
CDH4P55283 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH4P55283 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH4P55283 TRBV1-201ENST00000476502 284 ntBASIC2.32□□□□□ -2.04
CDH4P55283 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH4P55283 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH4P55283 MRPL42P6-201ENST00000486397 371 ntBASIC2.32□□□□□ -2.04
CDH4P55283 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH4P55283 GZMAP1-201ENST00000503054 631 ntBASIC2.32□□□□□ -2.04
CDH4P55283 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.32□□□□□ -2.04
CDH4P55283 SNORA31.6-201ENST00000516241 130 ntBASIC2.32□□□□□ -2.04
CDH4P55283 RN7SKP258-201ENST00000517151 304 ntBASIC2.32□□□□□ -2.04
CDH4P55283 SNRPGP18-201ENST00000553000 214 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms