Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.49□□□□□ -2.17
NUP98P52948 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.49□□□□□ -2.17
NUP98P52948 NDUFS5P6-201ENST00000529136 295 ntBASIC1.49□□□□□ -2.17
NUP98P52948 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.49□□□□□ -2.17
NUP98P52948 SETP7-201ENST00000552169 453 ntBASIC1.49□□□□□ -2.17
NUP98P52948 RN7SL622P-201ENST00000585292 275 ntBASIC1.49□□□□□ -2.17
NUP98P52948 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.49□□□□□ -2.17
NUP98P52948 AL359740.1-201ENST00000624340 592 ntBASIC1.49□□□□□ -2.17
NUP98P52948 AL512506.2-201ENST00000624472 458 ntBASIC1.49□□□□□ -2.17
NUP98P52948 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
NUP98P52948 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.49□□□□□ -2.17
NUP98P52948 AC010329.5-201ENST00000623497 2174 ntBASIC1.49□□□□□ -2.17
NUP98P52948 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.48□□□□□ -2.17
NUP98P52948 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NUP98P52948 RNU2-43P-201ENST00000410306 190 ntBASIC1.48□□□□□ -2.17
NUP98P52948 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.48□□□□□ -2.17
NUP98P52948 AC093422.3-201ENST00000428506 305 ntBASIC1.48□□□□□ -2.17
NUP98P52948 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.48□□□□□ -2.17
NUP98P52948 AC002542.1-201ENST00000440683 193 ntBASIC1.48□□□□□ -2.17
NUP98P52948 CALM1P1-201ENST00000442082 433 ntBASIC1.48□□□□□ -2.17
NUP98P52948 MTATP6P7-201ENST00000453315 681 ntBASIC1.48□□□□□ -2.17
NUP98P52948 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.48□□□□□ -2.17
NUP98P52948 RPL32P14-201ENST00000463196 378 ntBASIC1.48□□□□□ -2.17
NUP98P52948 AC055855.1-201ENST00000489563 579 ntBASIC1.48□□□□□ -2.17
NUP98P52948 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.48□□□□□ -2.17
NUP98P52948 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.48□□□□□ -2.17
NUP98P52948 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.48□□□□□ -2.17
NUP98P52948 AP005902.1-201ENST00000521358 186 ntBASIC1.48□□□□□ -2.17
NUP98P52948 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.48□□□□□ -2.17
NUP98P52948 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
NUP98P52948 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.48□□□□□ -2.17
NUP98P52948 AL359851.1-201ENST00000569460 4997 ntBASIC1.48□□□□□ -2.17
NUP98P52948 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.48□□□□□ -2.17
NUP98P52948 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.48□□□□□ -2.17
NUP98P52948 RNU6-234P-201ENST00000365229 104 ntBASIC1.47□□□□□ -2.17
NUP98P52948 Y_RNA.354-201ENST00000365448 111 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NUP98P52948 AL049734.2-201ENST00000441066 616 ntBASIC1.47□□□□□ -2.17
NUP98P52948 FGF7P5-201ENST00000441829 291 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AL353691.1-201ENST00000451332 387 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.47□□□□□ -2.17
NUP98P52948 FO393415.2-201ENST00000480085 343 ntBASIC1.47□□□□□ -2.17
NUP98P52948 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.47□□□□□ -2.17
NUP98P52948 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NUP98P52948 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NUP98P52948 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NUP98P52948 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NUP98P52948 RNU6-928P-201ENST00000516876 104 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AC118273.2-201ENST00000532092 465 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AL391261.3-201ENST00000557194 520 ntBASIC1.47□□□□□ -2.17
NUP98P52948 MIR4529-201ENST00000578110 78 ntBASIC1.47□□□□□ -2.17
NUP98P52948 MIR4287-201ENST00000579398 78 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.47□□□□□ -2.17
NUP98P52948 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.47□□□□□ -2.17
NUP98P52948 AC078899.2-201ENST00000595282 212 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AL161729.4-201ENST00000604650 476 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.47□□□□□ -2.17
NUP98P52948 SDR42E1P2-201ENST00000614861 481 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AC009090.3-201ENST00000616553 565 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AL163051.2-201ENST00000618976 735 ntBASIC1.47□□□□□ -2.17
NUP98P52948 SDR42E1P4-201ENST00000620894 481 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AC068057.2-201ENST00000624047 895 ntBASIC1.47□□□□□ -2.17
NUP98P52948 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NUP98P52948 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.47□□□□□ -2.17
NUP98P52948 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.47□□□□□ -2.17
NUP98P52948 RNU6-270P-201ENST00000364131 105 ntBASIC1.47□□□□□ -2.17
NUP98P52948 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.47□□□□□ -2.17
NUP98P52948 MIR1285-1-201ENST00000408593 84 ntBASIC1.47□□□□□ -2.17
NUP98P52948 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.47□□□□□ -2.17
NUP98P52948 AC004383.1-201ENST00000438135 289 ntBASIC1.47□□□□□ -2.17
NUP98P52948 MTCYBP35-201ENST00000503630 1137 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AC124947.2-202ENST00000552735 133 ntBASIC1.47□□□□□ -2.17
NUP98P52948 HSPE1P3-201ENST00000559254 309 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AC087465.1-201ENST00000560574 245 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AC007151.1-201ENST00000572774 483 ntBASIC1.47□□□□□ -2.17
NUP98P52948 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.47□□□□□ -2.17
NUP98P52948 AC136443.5-201ENST00000603741 370 ntBASIC1.47□□□□□ -2.17
NUP98P52948 FTX_3.1-201ENST00000610451 147 ntBASIC1.47□□□□□ -2.17
NUP98P52948 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NUP98P52948 MIR7157-201ENST00000635801 60 ntBASIC1.47□□□□□ -2.17
NUP98P52948 MFSD8-213ENST00000641134 1327 ntBASIC1.47□□□□□ -2.17
NUP98P52948 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
NUP98P52948 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.46□□□□□ -2.18
NUP98P52948 AL360221.1-201ENST00000445989 335 ntBASIC1.46□□□□□ -2.18
NUP98P52948 AC017099.1-201ENST00000448261 1028 ntBASIC1.46□□□□□ -2.18
NUP98P52948 AL121594.1-201ENST00000475906 575 ntBASIC1.46□□□□□ -2.18
NUP98P52948 ARL2BPP4-201ENST00000506854 471 ntBASIC1.46□□□□□ -2.18
NUP98P52948 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.46□□□□□ -2.18
NUP98P52948 SNORA48.10-201ENST00000516965 160 ntBASIC1.46□□□□□ -2.18
NUP98P52948 RNU2-19P-201ENST00000517288 84 ntBASIC1.46□□□□□ -2.18
NUP98P52948 AC010186.2-204ENST00000537668 439 ntBASIC1.46□□□□□ -2.18
NUP98P52948 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.46□□□□□ -2.18
NUP98P52948 AC233266.2-201ENST00000567067 528 ntBASIC1.46□□□□□ -2.18
NUP98P52948 AC024619.4-201ENST00000580924 316 ntBASIC1.46□□□□□ -2.18
NUP98P52948 DUXAP11-201ENST00000603858 526 ntBASIC1.46□□□□□ -2.18
NUP98P52948 USP9YP6-201ENST00000413550 854 ntBASIC1.45□□□□□ -2.18
NUP98P52948 XKRYP1-201ENST00000423438 492 ntBASIC1.45□□□□□ -2.18
NUP98P52948 XKRYP2-201ENST00000432915 492 ntBASIC1.45□□□□□ -2.18
NUP98P52948 UBE2V2P3-201ENST00000433562 437 ntBASIC1.45□□□□□ -2.18
NUP98P52948 RPL26P6-201ENST00000440913 438 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms