Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.87□□□□□ -1.63
USP11P51784 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.87□□□□□ -1.63
USP11P51784 PRELID3BP1-201ENST00000457142 540 ntBASIC4.87□□□□□ -1.63
USP11P51784 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.87□□□□□ -1.63
USP11P51784 RNU7-138P-201ENST00000459479 64 ntBASIC4.87□□□□□ -1.63
USP11P51784 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.87□□□□□ -1.63
USP11P51784 PARP4P3-201ENST00000510265 317 ntBASIC4.87□□□□□ -1.63
USP11P51784 CBX3P8-201ENST00000532412 525 ntBASIC4.87□□□□□ -1.63
USP11P51784 TOMM20P2-201ENST00000540082 421 ntBASIC4.87□□□□□ -1.63
USP11P51784 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.87□□□□□ -1.63
USP11P51784 AC136624.4-201ENST00000573044 370 ntBASIC4.87□□□□□ -1.63
USP11P51784 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.87□□□□□ -1.63
USP11P51784 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.87□□□□□ -1.63
USP11P51784 AC174048.1-201ENST00000603389 144 ntBASIC4.87□□□□□ -1.63
USP11P51784 AC010900.2-201ENST00000604508 210 ntBASIC4.87□□□□□ -1.63
USP11P51784 MIR7154-201ENST00000620673 73 ntBASIC4.87□□□□□ -1.63
USP11P51784 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
USP11P51784 AC068254.2-201ENST00000623938 3577 ntBASIC4.87□□□□□ -1.63
USP11P51784 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.86□□□□□ -1.63
USP11P51784 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.86□□□□□ -1.63
USP11P51784 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.86□□□□□ -1.63
USP11P51784 AC010300.1-201ENST00000600671 5134 ntBASIC4.86□□□□□ -1.63
USP11P51784 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
USP11P51784 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP11P51784 Y_RNA.20-201ENST00000362479 113 ntBASIC4.86□□□□□ -1.63
USP11P51784 RNU6-596P-201ENST00000365395 98 ntBASIC4.86□□□□□ -1.63
USP11P51784 RNU6-338P-201ENST00000383888 105 ntBASIC4.86□□□□□ -1.63
USP11P51784 RNU6-339P-201ENST00000384310 107 ntBASIC4.86□□□□□ -1.63
USP11P51784 RPL23AP48-201ENST00000406913 488 ntBASIC4.86□□□□□ -1.63
USP11P51784 AL160275.2-201ENST00000412010 394 ntBASIC4.86□□□□□ -1.63
USP11P51784 RPL23AP26-201ENST00000412728 464 ntBASIC4.86□□□□□ -1.63
USP11P51784 AL160275.3-201ENST00000423876 471 ntBASIC4.86□□□□□ -1.63
USP11P51784 CYCSP43-201ENST00000438233 310 ntBASIC4.86□□□□□ -1.63
USP11P51784 PCMTD1P1-201ENST00000455560 355 ntBASIC4.86□□□□□ -1.63
USP11P51784 LINC01399-202ENST00000458450 244 ntBASIC4.86□□□□□ -1.63
USP11P51784 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.86□□□□□ -1.63
USP11P51784 VN1R105P-201ENST00000486595 910 ntBASIC4.86□□□□□ -1.63
USP11P51784 AC104164.2-201ENST00000496953 495 ntBASIC4.86□□□□□ -1.63
USP11P51784 VWA8P1-201ENST00000510889 176 ntBASIC4.86□□□□□ -1.63
USP11P51784 AC005798.1-201ENST00000513715 387 ntBASIC4.86□□□□□ -1.63
USP11P51784 AC008694.2-201ENST00000517591 306 ntBASIC4.86□□□□□ -1.63
USP11P51784 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.86□□□□□ -1.63
USP11P51784 AC007566.2-201ENST00000603642 413 ntBASIC4.86□□□□□ -1.63
USP11P51784 AC009779.6-201ENST00000603972 165 ntBASIC4.86□□□□□ -1.63
USP11P51784 AC064801.1-201ENST00000612025 407 ntBASIC4.86□□□□□ -1.63
USP11P51784 AL445567.2-201ENST00000618935 498 ntBASIC4.86□□□□□ -1.63
USP11P51784 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.86□□□□□ -1.63
USP11P51784 U6.104-201ENST00000637979 90 ntBASIC4.86□□□□□ -1.63
USP11P51784 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP11P51784 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.86□□□□□ -1.63
USP11P51784 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
USP11P51784 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP11P51784 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.86□□□□□ -1.63
USP11P51784 IQCB2P-201ENST00000401788 1633 ntBASIC4.86□□□□□ -1.63
USP11P51784 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.85□□□□□ -1.63
USP11P51784 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.85□□□□□ -1.63
USP11P51784 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
USP11P51784 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
USP11P51784 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
USP11P51784 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP11P51784 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP11P51784 RNU1-15P-201ENST00000353977 144 ntBASIC4.85□□□□□ -1.63
USP11P51784 RNU1-108P-201ENST00000362556 161 ntBASIC4.85□□□□□ -1.63
USP11P51784 RNU6-989P-201ENST00000362756 107 ntBASIC4.85□□□□□ -1.63
USP11P51784 Y_RNA.150-201ENST00000363562 102 ntBASIC4.85□□□□□ -1.63
USP11P51784 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
USP11P51784 RNU6-190P-201ENST00000384154 102 ntBASIC4.85□□□□□ -1.63
USP11P51784 SNORD73A-201ENST00000386062 65 ntBASIC4.85□□□□□ -1.63
USP11P51784 RNA5SP36-201ENST00000410197 133 ntBASIC4.85□□□□□ -1.63
USP11P51784 RNU6-121P-201ENST00000410525 99 ntBASIC4.85□□□□□ -1.63
USP11P51784 AC092447.6-201ENST00000414578 210 ntBASIC4.85□□□□□ -1.63
USP11P51784 AL137014.1-201ENST00000420490 1226 ntBASIC4.85□□□□□ -1.63
USP11P51784 SDAD1P3-201ENST00000427380 333 ntBASIC4.85□□□□□ -1.63
USP11P51784 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.85□□□□□ -1.63
USP11P51784 NEFMP1-201ENST00000443423 1006 ntBASIC4.85□□□□□ -1.63
USP11P51784 snoU109.4-201ENST00000458953 143 ntBASIC4.85□□□□□ -1.63
USP11P51784 RNU7-169P-201ENST00000459456 61 ntBASIC4.85□□□□□ -1.63
USP11P51784 AC010618.1-201ENST00000469924 477 ntBASIC4.85□□□□□ -1.63
USP11P51784 AC109327.1-201ENST00000471666 403 ntBASIC4.85□□□□□ -1.63
USP11P51784 UQCRHP4-201ENST00000471686 272 ntBASIC4.85□□□□□ -1.63
USP11P51784 AC018437.1-201ENST00000492214 406 ntBASIC4.85□□□□□ -1.63
USP11P51784 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.85□□□□□ -1.63
USP11P51784 RN7SKP82-201ENST00000516786 223 ntBASIC4.85□□□□□ -1.63
USP11P51784 RN7SKP277-201ENST00000516895 283 ntBASIC4.85□□□□□ -1.63
USP11P51784 RN7SKP60-201ENST00000516985 239 ntBASIC4.85□□□□□ -1.63
USP11P51784 SNORA81.3-201ENST00000517283 198 ntBASIC4.85□□□□□ -1.63
USP11P51784 AC090281.1-201ENST00000523019 276 ntBASIC4.85□□□□□ -1.63
USP11P51784 AP003730.1-201ENST00000524605 285 ntBASIC4.85□□□□□ -1.63
USP11P51784 AP003733.2-201ENST00000529409 171 ntBASIC4.85□□□□□ -1.63
USP11P51784 AL159153.1-201ENST00000619688 317 ntBASIC4.85□□□□□ -1.63
USP11P51784 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
USP11P51784 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
USP11P51784 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP11P51784 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP11P51784 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.84□□□□□ -1.63
USP11P51784 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
USP11P51784 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.84□□□□□ -1.63
USP11P51784 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP11P51784 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP11P51784 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms