Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU6-223P-201ENST00000362830 107 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 SNORA38-201ENST00000363946 132 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 RNA5SP99-201ENST00000364020 114 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 Y_RNA.311-201ENST00000365068 96 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 RNU6-1328P-201ENST00000410938 106 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.18□□□□□ -2.06
TNFSF9P41273 MTCYBP38-201ENST00000417160 1123 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TNFSF9P41273 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.18□□□□□ -2.06
TNFSF9P41273 EEF1E1P1-201ENST00000446998 430 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 PAXBP1P1-201ENST00000449315 447 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 ZNF886P-201ENST00000450781 723 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.18□□□□□ -2.06
TNFSF9P41273 AC233279.1-201ENST00000455300 423 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.18□□□□□ -2.06
TNFSF9P41273 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.18□□□□□ -2.06
TNFSF9P41273 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.18□□□□□ -2.06
TNFSF9P41273 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.18□□□□□ -2.06
TNFSF9P41273 AC116337.1-201ENST00000509680 687 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AC098591.2-201ENST00000510152 315 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AC107222.1-201ENST00000510899 637 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 RNU5F-8P-201ENST00000515941 111 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.18□□□□□ -2.06
TNFSF9P41273 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.18□□□□□ -2.06
TNFSF9P41273 AC023824.2-201ENST00000566185 400 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 MIR5089-201ENST00000580047 84 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 MIR3616-201ENST00000584070 92 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AP000403.1-201ENST00000603349 851 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AC239868.4-201ENST00000608318 671 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AC009318.2-201ENST00000610917 651 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AC116618.1-201ENST00000634617 774 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AC080128.1-201ENST00000474389 1917 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 AC092447.10-201ENST00000620607 1652 ntBASIC2.18□□□□□ -2.06
TNFSF9P41273 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TNFSF9P41273 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TNFSF9P41273 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TNFSF9P41273 AC009902.3-201ENST00000606235 2172 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AC011477.1-204ENST00000623416 1325 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TNFSF9P41273 MTND5P29-201ENST00000458676 1807 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AL356292.1-201ENST00000283110 373 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 RNU6-853P-201ENST00000364306 107 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFSF9P41273 USP9YP33-201ENST00000412220 421 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.17□□□□□ -2.06
TNFSF9P41273 USP9YP11-201ENST00000427537 717 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 HSFY7P-201ENST00000432672 318 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.17□□□□□ -2.06
TNFSF9P41273 USP9YP35-201ENST00000435696 412 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 SNRPEP9-201ENST00000436794 238 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 HSFY8P-201ENST00000437934 318 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFSF9P41273 AC007327.1-201ENST00000447461 264 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AL021397.1-201ENST00000451806 248 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 HSFY5P-201ENST00000453726 309 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AL121769.1-201ENST00000469473 401 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 GTF2IP9-201ENST00000502460 301 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 RPL37P25-201ENST00000507308 276 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AC021146.8-201ENST00000507455 733 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 MTND4P2-201ENST00000507767 1203 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 HMGB3P3-201ENST00000510526 400 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AC022447.1-201ENST00000515358 464 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.17□□□□□ -2.06
TNFSF9P41273 AC135628.1-201ENST00000568867 534 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AC060771.1-201ENST00000582031 164 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AC004805.2-201ENST00000605382 482 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 AC090186.1-201ENST00000605991 572 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 MTND4P27-201ENST00000450813 1354 ntBASIC2.17□□□□□ -2.06
TNFSF9P41273 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TNFSF9P41273 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
TNFSF9P41273 RNU6-777P-201ENST00000364265 104 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.16□□□□□ -2.06
TNFSF9P41273 AC004854.1-201ENST00000440356 349 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 OSTCP8-201ENST00000445117 448 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 COX6CP12-201ENST00000446748 202 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 TPT1P14-201ENST00000448018 505 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.16□□□□□ -2.06
TNFSF9P41273 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFSF9P41273 AC072039.1-201ENST00000477611 581 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFSF9P41273 AC108729.1-201ENST00000487812 947 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 MTAPP1-201ENST00000489154 819 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TNFSF9P41273 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.16□□□□□ -2.06
TNFSF9P41273 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFSF9P41273 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.16□□□□□ -2.06
TNFSF9P41273 RNU1-104P-201ENST00000517280 175 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFSF9P41273 OR4R1P-201ENST00000529879 463 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.16□□□□□ -2.06
TNFSF9P41273 PRELID2P1-201ENST00000552837 301 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 AL359212.1-201ENST00000556608 614 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.16□□□□□ -2.06
TNFSF9P41273 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.16□□□□□ -2.06
TNFSF9P41273 AC011458.1-201ENST00000604034 617 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 AL139022.2-201ENST00000606934 443 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 RNU4-5P-201ENST00000607255 135 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 AC009974.1-201ENST00000608881 455 ntBASIC2.16□□□□□ -2.06
TNFSF9P41273 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms