Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.86□□□□□ -2.11
COL18A1P39060 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.86□□□□□ -2.11
COL18A1P39060 AC122134.1-202ENST00000569111 1201 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.86□□□□□ -2.11
COL18A1P39060 AL445435.1-201ENST00000604232 665 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 AC090772.4-201ENST00000623599 362 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 AC006927.2-201ENST00000639256 389 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 AC005832.2-201ENST00000538921 1430 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
COL18A1P39060 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.85□□□□□ -2.11
COL18A1P39060 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL18A1P39060 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 RNU1-22P-201ENST00000363334 158 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 RNU6-193P-201ENST00000410977 107 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 AC019178.2-201ENST00000423595 505 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 AC007742.1-201ENST00000425789 329 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 ELOCP26-201ENST00000436067 329 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 AC092427.1-201ENST00000439177 601 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 RPL30P5-201ENST00000494923 336 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.85□□□□□ -2.11
COL18A1P39060 OR5BM1P-201ENST00000512021 366 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 MTCO3P15-201ENST00000526563 574 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.85□□□□□ -2.11
COL18A1P39060 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL18A1P39060 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL18A1P39060 MIR4637-201ENST00000582405 84 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 AL136363.1-201ENST00000605349 337 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 AL512506.1-201ENST00000613918 449 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.85□□□□□ -2.11
COL18A1P39060 AC095038.3-201ENST00000634439 195 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 FO624990.1-201ENST00000636373 85 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 MKKS-204ENST00000639674 192 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL18A1P39060 SNRPEP3-201ENST00000338402 276 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 RNU6-198P-201ENST00000384258 104 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 RNU6-342P-201ENST00000384521 104 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 CCDC58P2-201ENST00000417131 366 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 AL356320.2-201ENST00000417263 507 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 MTCO2P5-201ENST00000422621 426 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.85□□□□□ -2.11
COL18A1P39060 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.85□□□□□ -2.11
COL18A1P39060 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.85□□□□□ -2.11
COL18A1P39060 RPL37P25-201ENST00000507308 276 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.85□□□□□ -2.11
COL18A1P39060 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.85□□□□□ -2.11
COL18A1P39060 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.85□□□□□ -2.11
COL18A1P39060 AL136520.1-202ENST00000555494 763 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.85□□□□□ -2.11
COL18A1P39060 VN1R87P-201ENST00000596706 487 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 AC004852.3-201ENST00000614131 326 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 AP000943.4-201ENST00000622912 357 ntBASIC1.85□□□□□ -2.11
COL18A1P39060 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL18A1P39060 AL356473.1-201ENST00000406203 1408 ntBASIC1.84□□□□□ -2.11
COL18A1P39060 Y_RNA.295-201ENST00000364918 102 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 AL365496.1-201ENST00000426885 215 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.84□□□□□ -2.12
COL18A1P39060 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.84□□□□□ -2.12
COL18A1P39060 AC007395.1-201ENST00000451333 677 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 AC234775.1-201ENST00000454247 670 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 AC092155.2-201ENST00000454675 477 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 RBM43P1-201ENST00000476891 1081 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 AC004223.1-201ENST00000479840 271 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.84□□□□□ -2.12
COL18A1P39060 AC034222.1-201ENST00000494052 532 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 RNU6-798P-201ENST00000516912 103 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 RNU6-1223P-201ENST00000517124 104 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 AP003066.2-201ENST00000529375 555 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.84□□□□□ -2.12
COL18A1P39060 AC138915.2-201ENST00000569776 97 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 MTATP6P2-201ENST00000603319 678 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 AC004987.4-201ENST00000603383 338 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 AL356094.1-201ENST00000624663 1212 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.84□□□□□ -2.12
COL18A1P39060 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.84□□□□□ -2.12
COL18A1P39060 AC135776.4-201ENST00000624300 1904 ntBASIC1.84□□□□□ -2.12
COL18A1P39060 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
COL18A1P39060 RNU5B-4P-201ENST00000363508 111 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL18A1P39060 RNU2-72P-201ENST00000411175 163 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 RPL26P6-201ENST00000440913 438 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.83□□□□□ -2.12
COL18A1P39060 AC244505.3-201ENST00000454598 187 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 AC026410.2-201ENST00000460281 156 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.83□□□□□ -2.12
COL18A1P39060 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.83□□□□□ -2.12
COL18A1P39060 AC113420.1-201ENST00000507903 571 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 RNA5SP364-201ENST00000516938 78 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL18A1P39060 AC022861.1-201ENST00000522981 663 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 AC125611.1-201ENST00000549563 229 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 AL137100.2-201ENST00000555786 315 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 AC140725.3-201ENST00000616193 880 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 AL133216.2-202ENST00000634512 349 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 MIR4275-201ENST00000636486 87 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL18A1P39060 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
COL18A1P39060 PABPC1P9-201ENST00000426076 1612 ntBASIC1.83□□□□□ -2.12
COL18A1P39060 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.83□□□□□ -2.12
COL18A1P39060 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
COL18A1P39060 RNU5A-1-201ENST00000362698 116 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms