Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC009090.3-201ENST00000616553 565 ntBASIC1.88□□□□□ -2.11
RPA3P35244 AC231657.1-201ENST00000624313 397 ntBASIC1.88□□□□□ -2.11
RPA3P35244 AL356094.1-201ENST00000624663 1212 ntBASIC1.88□□□□□ -2.11
RPA3P35244 MIR7157-201ENST00000635801 60 ntBASIC1.88□□□□□ -2.11
RPA3P35244 U2.21-201ENST00000637295 81 ntBASIC1.88□□□□□ -2.11
RPA3P35244 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPA3P35244 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RPA3P35244 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.87□□□□□ -2.11
RPA3P35244 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RPA3P35244 SNORD114-1-201ENST00000362705 72 ntBASIC1.87□□□□□ -2.11
RPA3P35244 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
RPA3P35244 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RPA3P35244 Y_RNA.578-201ENST00000390903 88 ntBASIC1.87□□□□□ -2.11
RPA3P35244 RNU6-754P-201ENST00000391166 107 ntBASIC1.87□□□□□ -2.11
RPA3P35244 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
RPA3P35244 AL355497.1-201ENST00000406262 551 ntBASIC1.87□□□□□ -2.11
RPA3P35244 SNORA11.2-201ENST00000408318 127 ntBASIC1.87□□□□□ -2.11
RPA3P35244 UBE2FP1-201ENST00000416536 447 ntBASIC1.87□□□□□ -2.11
RPA3P35244 MTCYBP38-201ENST00000417160 1123 ntBASIC1.87□□□□□ -2.11
RPA3P35244 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.87□□□□□ -2.11
RPA3P35244 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.87□□□□□ -2.11
RPA3P35244 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.87□□□□□ -2.11
RPA3P35244 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.87□□□□□ -2.11
RPA3P35244 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
RPA3P35244 MTND5P14-201ENST00000441481 1267 ntBASIC1.87□□□□□ -2.11
RPA3P35244 MTND1P31-201ENST00000449206 961 ntBASIC1.87□□□□□ -2.11
RPA3P35244 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA3P35244 CECR9-201ENST00000453421 199 ntBASIC1.87□□□□□ -2.11
RPA3P35244 PPP1R2P5-201ENST00000457256 603 ntBASIC1.87□□□□□ -2.11
RPA3P35244 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA3P35244 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.87□□□□□ -2.11
RPA3P35244 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA3P35244 AC004944.1-201ENST00000517807 3059 ntBASIC1.87□□□□□ -2.11
RPA3P35244 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.87□□□□□ -2.11
RPA3P35244 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.87□□□□□ -2.11
RPA3P35244 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.87□□□□□ -2.11
RPA3P35244 CBX3P7-201ENST00000532876 502 ntBASIC1.87□□□□□ -2.11
RPA3P35244 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.87□□□□□ -2.11
RPA3P35244 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA3P35244 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.87□□□□□ -2.11
RPA3P35244 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA3P35244 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA3P35244 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.87□□□□□ -2.11
RPA3P35244 AF038458.1-201ENST00000588406 262 ntBASIC1.87□□□□□ -2.11
RPA3P35244 MTATP6P2-201ENST00000603319 678 ntBASIC1.87□□□□□ -2.11
RPA3P35244 RPP40P2-201ENST00000603596 712 ntBASIC1.87□□□□□ -2.11
RPA3P35244 AL161423.1-201ENST00000613700 262 ntBASIC1.87□□□□□ -2.11
RPA3P35244 AC010678.1-201ENST00000614118 713 ntBASIC1.87□□□□□ -2.11
RPA3P35244 AC007490.1-201ENST00000624321 703 ntBASIC1.87□□□□□ -2.11
RPA3P35244 MIR3199-2-201ENST00000636243 86 ntBASIC1.87□□□□□ -2.11
RPA3P35244 AC099063.3-201ENST00000642066 185 ntBASIC1.87□□□□□ -2.11
RPA3P35244 AL079343.1-201ENST00000572358 1771 ntBASIC1.87□□□□□ -2.11
RPA3P35244 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPA3P35244 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.86□□□□□ -2.11
RPA3P35244 RNU6-778P-201ENST00000363269 103 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AL590084.2-201ENST00000401481 382 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AL356421.1-201ENST00000403255 413 ntBASIC1.86□□□□□ -2.11
RPA3P35244 CCNG1P1-201ENST00000406783 885 ntBASIC1.86□□□□□ -2.11
RPA3P35244 NDUFS5P4-201ENST00000412983 318 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA3P35244 HMGB3P12-201ENST00000438745 556 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA3P35244 MTND1P9-201ENST00000453775 944 ntBASIC1.86□□□□□ -2.11
RPA3P35244 HMGB1P36-201ENST00000487709 576 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA3P35244 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.86□□□□□ -2.11
RPA3P35244 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA3P35244 RNU6-150P-201ENST00000516237 95 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA3P35244 AC087894.1-201ENST00000538359 518 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA3P35244 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA3P35244 AC126365.2-201ENST00000580630 379 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.86□□□□□ -2.11
RPA3P35244 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.86□□□□□ -2.11
RPA3P35244 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AC069294.1-201ENST00000608397 350 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AC009237.15-201ENST00000610252 501 ntBASIC1.86□□□□□ -2.11
RPA3P35244 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA3P35244 AL158801.5-201ENST00000623123 465 ntBASIC1.86□□□□□ -2.11
RPA3P35244 AP002791.1-201ENST00000623291 381 ntBASIC1.86□□□□□ -2.11
RPA3P35244 PISRT1-201ENST00000626175 531 ntBASIC1.86□□□□□ -2.11
RPA3P35244 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RPA3P35244 Y_RNA.245-201ENST00000364493 95 ntBASIC1.85□□□□□ -2.11
RPA3P35244 USP9YP21-201ENST00000420603 432 ntBASIC1.85□□□□□ -2.11
RPA3P35244 AC013262.1-201ENST00000426710 252 ntBASIC1.85□□□□□ -2.11
RPA3P35244 ELOCP14-201ENST00000428070 331 ntBASIC1.85□□□□□ -2.11
RPA3P35244 MTND1P28-201ENST00000435623 950 ntBASIC1.85□□□□□ -2.11
RPA3P35244 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.85□□□□□ -2.11
RPA3P35244 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.85□□□□□ -2.11
RPA3P35244 ELOCP7-201ENST00000439968 331 ntBASIC1.85□□□□□ -2.11
RPA3P35244 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.85□□□□□ -2.11
RPA3P35244 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.85□□□□□ -2.11
RPA3P35244 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPA3P35244 AC068587.2-201ENST00000478386 781 ntBASIC1.85□□□□□ -2.11
RPA3P35244 RPS15AP36-201ENST00000492022 382 ntBASIC1.85□□□□□ -2.11
RPA3P35244 RNU6-1028P-201ENST00000517164 93 ntBASIC1.85□□□□□ -2.11
RPA3P35244 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.85□□□□□ -2.11
RPA3P35244 OR5AQ1P-201ENST00000527596 927 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms