Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 RPS24P1-201ENST00000438550 371 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC9P31274 AL049874.1-201ENST00000489560 388 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC9P31274 AC138853.1-201ENST00000503549 823 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.4□□□□□ -1.87
HOXC9P31274 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC9P31274 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HOXC9P31274 RNA5SP337-201ENST00000517007 109 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 RNU6-430P-201ENST00000517078 107 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC9P31274 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC9P31274 AC022880.1-201ENST00000534017 973 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC9P31274 AP002770.2-201ENST00000543613 532 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC9P31274 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXC9P31274 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC9P31274 AC109347.2-201ENST00000610220 349 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HOXC9P31274 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.4□□□□□ -1.87
HOXC9P31274 AC098679.4-201ENST00000624241 654 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC9P31274 MTND5P19-201ENST00000424872 1794 ntBASIC3.4□□□□□ -1.87
HOXC9P31274 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXC9P31274 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXC9P31274 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HOXC9P31274 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
HOXC9P31274 RNU6-223P-201ENST00000362830 107 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 RNU2-62P-201ENST00000410868 191 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 AC104651.1-201ENST00000427559 735 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 RABEPKP1-201ENST00000440529 1026 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 MTND1P12-201ENST00000455231 147 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC9P31274 SNORA31.8-201ENST00000516327 108 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HOXC9P31274 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC9P31274 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
HOXC9P31274 AL355836.1-201ENST00000555951 870 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC9P31274 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC9P31274 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC9P31274 AC009063.1-201ENST00000563342 702 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 AC055876.1-202ENST00000567053 138 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC9P31274 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC9P31274 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC9P31274 NDUFA8P1-201ENST00000605525 367 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 MIR98-201ENST00000606724 119 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 AC005332.10-201ENST00000612725 619 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 AC068880.5-201ENST00000624331 290 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 AC084035.1-201ENST00000634543 607 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 LRRC77P-213ENST00000637727 880 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 AC092447.7-201ENST00000422212 1621 ntBASIC3.39□□□□□ -1.87
HOXC9P31274 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC9P31274 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HOXC9P31274 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC9P31274 RNA5SP432-201ENST00000362480 116 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 RNU4-1-201ENST00000363925 141 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC9P31274 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HOXC9P31274 TXNP7-201ENST00000406296 293 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC9P31274 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC9P31274 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXC9P31274 AC008850.1-201ENST00000427546 362 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 FCF1P1-201ENST00000432690 571 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC9P31274 AC005094.1-201ENST00000440420 368 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 MTCO3P45-201ENST00000443036 613 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AC010095.1-201ENST00000443543 144 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXC9P31274 RBM43P1-201ENST00000476891 1081 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC9P31274 Vault.3-201ENST00000516676 95 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXC9P31274 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXC9P31274 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC9P31274 AC005951.2-201ENST00000576282 495 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXC9P31274 AL161729.4-201ENST00000604650 476 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AC106900.2-201ENST00000604994 317 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AL451064.1-201ENST00000607718 471 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AC072046.2-201ENST00000618366 268 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HOXC9P31274 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXC9P31274 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC9P31274 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC9P31274 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HOXC9P31274 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC9P31274 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXC9P31274 AC138915.3-201ENST00000562908 1389 ntBASIC3.38□□□□□ -1.87
HOXC9P31274 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC9P31274 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXC9P31274 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC9P31274 DEFB109C-201ENST00000382575 264 ntBASIC3.37□□□□□ -1.87
HOXC9P31274 DEFB109B-201ENST00000382656 264 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms