Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU6-851P-201ENST00000384565 107 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 RPS3AP44-201ENST00000425466 790 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA13P31271 AC093106.2-201ENST00000428212 385 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA13P31271 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA13P31271 RPL21P41-201ENST00000459863 264 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 MTCO2P29-201ENST00000465212 189 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 HMGN2P13-201ENST00000476476 274 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 RN7SL432P-201ENST00000484057 298 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA13P31271 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA13P31271 AC079600.2-201ENST00000550076 130 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA13P31271 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA13P31271 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA13P31271 AC024153.1-201ENST00000603103 365 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 MIR98-201ENST00000606724 119 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 AC103710.2-201ENST00000609912 942 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA13P31271 AC092447.7-201ENST00000422212 1621 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 AP003122.5-201ENST00000527668 3766 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA13P31271 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXA13P31271 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA13P31271 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA13P31271 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA13P31271 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA13P31271 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
HOXA13P31271 RNU1-101P-201ENST00000391171 127 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 RNU6-648P-201ENST00000410190 107 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 RNA5SP38-201ENST00000410750 119 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA13P31271 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXA13P31271 USP9YP36-201ENST00000424581 829 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA13P31271 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA13P31271 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXA13P31271 HIGD1AP11-201ENST00000438361 280 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AC105272.1-201ENST00000438604 198 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 MTND4P25-201ENST00000441039 533 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA13P31271 NEFMP1-201ENST00000443423 1006 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA13P31271 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA13P31271 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXA13P31271 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
HOXA13P31271 RPL9P33-201ENST00000484311 566 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 HMGB1P41-201ENST00000520234 440 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA13P31271 AC034105.3-201ENST00000565294 442 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AC006504.3-201ENST00000586818 523 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AL670379.6-201ENST00000603753 252 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AL670379.11-201ENST00000604059 253 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AC008162.1-201ENST00000604718 254 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AL670379.1-201ENST00000604752 252 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AL670379.5-201ENST00000605253 252 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AL670379.12-201ENST00000605291 253 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AL670379.8-201ENST00000605353 252 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 AL670379.7-201ENST00000605823 252 ntBASIC3.27□□□□□ -1.89
HOXA13P31271 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA13P31271 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA13P31271 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA13P31271 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA13P31271 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HOXA13P31271 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HOXA13P31271 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA13P31271 RN7SKP226-201ENST00000364912 300 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 RNU6-805P-201ENST00000365643 106 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA13P31271 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA13P31271 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA13P31271 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXA13P31271 AL645937.1-202ENST00000421799 937 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA13P31271 RPL31P35-201ENST00000431058 377 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 DNAJC19P4-201ENST00000440115 345 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 RPS24P13-201ENST00000442520 397 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXA13P31271 RN7SL75P-201ENST00000461926 281 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA13P31271 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXA13P31271 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA13P31271 RNU6-928P-201ENST00000516876 104 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 RNA5SP290-201ENST00000517133 127 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 RN7SKP258-201ENST00000517151 304 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HOXA13P31271 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
HOXA13P31271 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA13P31271 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.26□□□□□ -1.89
HOXA13P31271 ATP5F1P5-201ENST00000526403 760 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.26□□□□□ -1.89
HOXA13P31271 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA13P31271 AC107016.2-201ENST00000547968 190 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA13P31271 MIR3609-201ENST00000582661 80 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 NRBF2P1-201ENST00000587407 859 ntBASIC3.26□□□□□ -1.89
HOXA13P31271 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms