Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL365496.1-201ENST00000426885 215 ntBASIC1.15□□□□□ -2.22
CLIP1P30622 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.15□□□□□ -2.22
CLIP1P30622 AC104997.1-201ENST00000519761 717 ntBASIC1.15□□□□□ -2.22
CLIP1P30622 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.15□□□□□ -2.22
CLIP1P30622 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.15□□□□□ -2.22
CLIP1P30622 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.15□□□□□ -2.22
CLIP1P30622 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CLIP1P30622 Y_RNA.258-201ENST00000364613 105 ntBASIC1.15□□□□□ -2.23
CLIP1P30622 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.15□□□□□ -2.23
CLIP1P30622 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.15□□□□□ -2.23
CLIP1P30622 KLF3P2-201ENST00000465138 268 ntBASIC1.15□□□□□ -2.23
CLIP1P30622 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.15□□□□□ -2.23
CLIP1P30622 AC008834.1-201ENST00000511612 175 ntBASIC1.15□□□□□ -2.23
CLIP1P30622 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.15□□□□□ -2.23
CLIP1P30622 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.15□□□□□ -2.23
CLIP1P30622 AL136313.1-201ENST00000624804 202 ntBASIC1.15□□□□□ -2.23
CLIP1P30622 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CLIP1P30622 SDAD1P2-201ENST00000441308 2028 ntBASIC1.14□□□□□ -2.23
CLIP1P30622 ZNF37BP-203ENST00000452306 1352 ntBASIC1.14□□□□□ -2.23
CLIP1P30622 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CLIP1P30622 MIR1250-201ENST00000408098 113 ntBASIC1.14□□□□□ -2.23
CLIP1P30622 TMEM167AP1-201ENST00000423409 219 ntBASIC1.14□□□□□ -2.23
CLIP1P30622 AC096920.1-201ENST00000423991 241 ntBASIC1.14□□□□□ -2.23
CLIP1P30622 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.14□□□□□ -2.23
CLIP1P30622 RPS15AP27-201ENST00000449183 343 ntBASIC1.14□□□□□ -2.23
CLIP1P30622 AC139453.3-201ENST00000493276 369 ntBASIC1.14□□□□□ -2.23
CLIP1P30622 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.14□□□□□ -2.23
CLIP1P30622 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.14□□□□□ -2.23
CLIP1P30622 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.14□□□□□ -2.23
CLIP1P30622 AC013244.2-201ENST00000603396 103 ntBASIC1.14□□□□□ -2.23
CLIP1P30622 MIR6835-201ENST00000621552 64 ntBASIC1.14□□□□□ -2.23
CLIP1P30622 ZNF29P-201ENST00000225587 168 ntBASIC1.13□□□□□ -2.23
CLIP1P30622 Y_RNA.68-201ENST00000362881 102 ntBASIC1.13□□□□□ -2.23
CLIP1P30622 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.13□□□□□ -2.23
CLIP1P30622 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.13□□□□□ -2.23
CLIP1P30622 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.13□□□□□ -2.23
CLIP1P30622 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.13□□□□□ -2.23
CLIP1P30622 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.13□□□□□ -2.23
CLIP1P30622 AC112518.2-201ENST00000508565 425 ntBASIC1.13□□□□□ -2.23
CLIP1P30622 AC104108.1-201ENST00000509930 412 ntBASIC1.13□□□□□ -2.23
CLIP1P30622 SNORA31.8-201ENST00000516327 108 ntBASIC1.13□□□□□ -2.23
CLIP1P30622 AC103833.1-201ENST00000517442 172 ntBASIC1.13□□□□□ -2.23
CLIP1P30622 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.13□□□□□ -2.23
CLIP1P30622 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.13□□□□□ -2.23
CLIP1P30622 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.13□□□□□ -2.23
CLIP1P30622 AL391834.1-201ENST00000609609 560 ntBASIC1.13□□□□□ -2.23
CLIP1P30622 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CLIP1P30622 RBBP8P1-201ENST00000449447 1844 ntBASIC1.12□□□□□ -2.23
CLIP1P30622 NACAP2-201ENST00000318548 624 ntBASIC1.12□□□□□ -2.23
CLIP1P30622 RPS3AP24-201ENST00000407896 734 ntBASIC1.12□□□□□ -2.23
CLIP1P30622 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.12□□□□□ -2.23
CLIP1P30622 AC016691.1-201ENST00000441321 413 ntBASIC1.12□□□□□ -2.23
CLIP1P30622 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.12□□□□□ -2.23
CLIP1P30622 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.12□□□□□ -2.23
CLIP1P30622 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.12□□□□□ -2.23
CLIP1P30622 SNORA48.11-201ENST00000517015 89 ntBASIC1.12□□□□□ -2.23
CLIP1P30622 AC092451.2-201ENST00000538746 658 ntBASIC1.12□□□□□ -2.23
CLIP1P30622 DUSP12P1-201ENST00000612874 516 ntBASIC1.12□□□□□ -2.23
CLIP1P30622 RNA5SP391-201ENST00000363456 119 ntBASIC1.11□□□□□ -2.23
CLIP1P30622 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.11□□□□□ -2.23
CLIP1P30622 RPS20P20-201ENST00000460498 340 ntBASIC1.11□□□□□ -2.23
CLIP1P30622 AC117454.1-201ENST00000491120 168 ntBASIC1.11□□□□□ -2.23
CLIP1P30622 Y_RNA.681-201ENST00000516445 113 ntBASIC1.11□□□□□ -2.23
CLIP1P30622 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.11□□□□□ -2.23
CLIP1P30622 AC021646.1-201ENST00000605469 484 ntBASIC1.11□□□□□ -2.23
CLIP1P30622 AL355810.1-201ENST00000614629 552 ntBASIC1.11□□□□□ -2.23
CLIP1P30622 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.11□□□□□ -2.23
CLIP1P30622 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CLIP1P30622 RNU1-78P-201ENST00000391248 165 ntBASIC1.1□□□□□ -2.23
CLIP1P30622 HMGB3P31-201ENST00000413333 595 ntBASIC1.1□□□□□ -2.23
CLIP1P30622 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.1□□□□□ -2.23
CLIP1P30622 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.1□□□□□ -2.23
CLIP1P30622 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.1□□□□□ -2.23
CLIP1P30622 RPS27AP10-201ENST00000496103 208 ntBASIC1.1□□□□□ -2.23
CLIP1P30622 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.1□□□□□ -2.23
CLIP1P30622 AC004812.1-201ENST00000540773 146 ntBASIC1.1□□□□□ -2.23
CLIP1P30622 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.1□□□□□ -2.23
CLIP1P30622 AC087465.1-201ENST00000560574 245 ntBASIC1.1□□□□□ -2.23
CLIP1P30622 SULT1C2P1-202ENST00000562418 459 ntBASIC1.1□□□□□ -2.23
CLIP1P30622 VN1R81P-201ENST00000602085 372 ntBASIC1.1□□□□□ -2.23
CLIP1P30622 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.1□□□□□ -2.23
CLIP1P30622 AC087821.2-201ENST00000637086 450 ntBASIC1.1□□□□□ -2.23
CLIP1P30622 MIR6866-201ENST00000638146 69 ntBASIC1.1□□□□□ -2.23
CLIP1P30622 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.1□□□□□ -2.23
CLIP1P30622 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.1□□□□□ -2.23
CLIP1P30622 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
CLIP1P30622 OR4G2P-201ENST00000328113 903 ntBASIC1.09□□□□□ -2.23
CLIP1P30622 RNA5SP257-201ENST00000363023 116 ntBASIC1.09□□□□□ -2.23
CLIP1P30622 MIR320B1-201ENST00000390209 79 ntBASIC1.09□□□□□ -2.23
CLIP1P30622 CR848007.2-201ENST00000424918 787 ntBASIC1.09□□□□□ -2.23
CLIP1P30622 AC118273.2-201ENST00000532092 465 ntBASIC1.09□□□□□ -2.23
CLIP1P30622 MIR7515-201ENST00000637837 67 ntBASIC1.09□□□□□ -2.23
CLIP1P30622 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CLIP1P30622 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLIP1P30622 CBX3P1-201ENST00000325243 554 ntBASIC1.08□□□□□ -2.24
CLIP1P30622 SNORD114-23-201ENST00000363536 72 ntBASIC1.08□□□□□ -2.24
CLIP1P30622 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.08□□□□□ -2.24
CLIP1P30622 MIR936-201ENST00000401264 98 ntBASIC1.08□□□□□ -2.24
CLIP1P30622 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.08□□□□□ -2.24
CLIP1P30622 AL691517.1-201ENST00000440833 1235 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms