Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.35□□□□□ -1.87
TM4SF1P30408 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.35□□□□□ -1.87
TM4SF1P30408 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TM4SF1P30408 AC009487.2-201ENST00000420969 6821 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AC004972.1-201ENST00000623934 2209 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 FARSBP1-201ENST00000435808 1778 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 Y_RNA.245-201ENST00000364493 95 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 RNY4P34-201ENST00000364779 95 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 SNORD116-9-201ENST00000384000 95 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 SNORD116-3-201ENST00000384287 95 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 SNORD116-7-201ENST00000384404 95 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 SNORD116-5-201ENST00000384462 95 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 MIR592-201ENST00000384959 97 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TM4SF1P30408 ZNF90P2-204ENST00000419323 1075 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AC104651.1-201ENST00000427559 735 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.34□□□□□ -1.87
TM4SF1P30408 AC073614.1-201ENST00000438690 650 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.34□□□□□ -1.87
TM4SF1P30408 NEFMP1-201ENST00000443423 1006 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AL136380.1-201ENST00000447970 162 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 ST13P20-201ENST00000447996 1065 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 SNORD42A-201ENST00000459584 64 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.34□□□□□ -1.87
TM4SF1P30408 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.34□□□□□ -1.87
TM4SF1P30408 LARP1BP2-201ENST00000486594 519 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.34□□□□□ -1.87
TM4SF1P30408 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.34□□□□□ -1.87
TM4SF1P30408 AMZ2P1-203ENST00000565833 850 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.34□□□□□ -1.87
TM4SF1P30408 DPPA3P3-201ENST00000603842 430 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AC004852.3-201ENST00000614131 326 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AL589994.2-201ENST00000621124 579 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AP003122.6-201ENST00000623831 495 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AL603839.4-201ENST00000624658 1005 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 PISRT1-201ENST00000626175 531 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 AC110994.2-201ENST00000635481 492 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TM4SF1P30408 AC093908.1-201ENST00000623125 8092 ntBASIC3.34□□□□□ -1.87
TM4SF1P30408 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
TM4SF1P30408 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TM4SF1P30408 AC103988.1-201ENST00000566382 2177 ntBASIC3.34□□□□□ -1.88
TM4SF1P30408 MIR26A1-201ENST00000362205 77 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 Y_RNA.201-201ENST00000364052 96 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 AC127391.1-201ENST00000411737 98 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 BX276092.3-201ENST00000424182 230 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.33□□□□□ -1.88
TM4SF1P30408 BNIP3P2-201ENST00000441221 577 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.33□□□□□ -1.88
TM4SF1P30408 SNRPGP6-201ENST00000451124 220 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 UQCRHP3-201ENST00000451503 251 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 RNU6-1092P-201ENST00000516955 87 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TM4SF1P30408 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.33□□□□□ -1.88
TM4SF1P30408 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.33□□□□□ -1.88
TM4SF1P30408 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.33□□□□□ -1.88
TM4SF1P30408 PIGPP4-201ENST00000584447 307 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.33□□□□□ -1.88
TM4SF1P30408 NBR2-204ENST00000587322 63 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
TM4SF1P30408 AC098826.3-201ENST00000603823 466 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.33□□□□□ -1.88
TM4SF1P30408 AC097065.2-201ENST00000608159 533 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 AL133173.2-201ENST00000614270 90 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 AC034102.8-201ENST00000615146 484 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.33□□□□□ -1.88
TM4SF1P30408 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.33□□□□□ -1.88
TM4SF1P30408 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TM4SF1P30408 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.33□□□□□ -1.88
TM4SF1P30408 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.32□□□□□ -1.88
TM4SF1P30408 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.32□□□□□ -1.88
TM4SF1P30408 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF1P30408 SNORD56.2-201ENST00000363242 71 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 RNU6-511P-201ENST00000363496 107 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 RNA5SP139-201ENST00000364340 117 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 SNORA14A-201ENST00000364773 135 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 RNU6-701P-201ENST00000384059 107 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 RNU6-817P-201ENST00000391083 104 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 RPL7P10-201ENST00000417407 739 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.32□□□□□ -1.88
TM4SF1P30408 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF1P30408 AC092047.1-201ENST00000424997 240 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 RPS24P1-201ENST00000438550 371 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF1P30408 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF1P30408 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
TM4SF1P30408 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.32□□□□□ -1.88
TM4SF1P30408 AL135752.1-201ENST00000479477 471 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF1P30408 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.32□□□□□ -1.88
TM4SF1P30408 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF1P30408 RNA5SP320-201ENST00000516263 124 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 Vault.3-201ENST00000516676 95 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 AP003122.4-201ENST00000530980 758 ntBASIC3.32□□□□□ -1.88
TM4SF1P30408 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TM4SF1P30408 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF1P30408 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms