Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL356057.2-201ENST00000403318 432 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 MTND5P25-201ENST00000430499 799 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 BMI1P1-201ENST00000445879 941 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A5P29400 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A5P29400 SNORA48.9-201ENST00000516419 162 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A5P29400 AP003066.2-201ENST00000529375 555 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A5P29400 MIR3117-201ENST00000584034 78 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AC073413.2-201ENST00000604332 360 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AC008133.2-201ENST00000624540 351 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 MIR203B-201ENST00000636080 86 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AL590396.4-201ENST00000636779 956 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
COL4A5P29400 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
COL4A5P29400 SNORD56.4-201ENST00000363883 71 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A5P29400 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A5P29400 RPS3AP44-201ENST00000425466 790 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AC234064.1-201ENST00000436312 247 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 GTF2IP12-201ENST00000456547 356 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AC013828.1-201ENST00000481845 158 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AC022483.1-201ENST00000514020 567 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A5P29400 AC087808.1-201ENST00000520501 361 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AP004607.1-201ENST00000524456 203 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A5P29400 BNIP3P24-201ENST00000593398 557 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 DUXAP10-204ENST00000612052 616 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A5P29400 PABPC1P9-201ENST00000426076 1612 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 DDX43P2-201ENST00000604753 1354 ntBASIC1.48□□□□□ -2.17
COL4A5P29400 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.47□□□□□ -2.17
COL4A5P29400 CR848007.1-201ENST00000442354 1699 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL4A5P29400 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL4A5P29400 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.47□□□□□ -2.17
COL4A5P29400 RNU6-1105P-201ENST00000384774 107 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 ANAPC10P1-201ENST00000395991 556 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 AL356131.1-201ENST00000405826 414 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 RNU6-516P-201ENST00000411381 104 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 MORF4L1P7-201ENST00000426038 703 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.47□□□□□ -2.17
COL4A5P29400 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.47□□□□□ -2.17
COL4A5P29400 MTCO1P48-201ENST00000448024 1096 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 AL049714.1-201ENST00000466686 347 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 RPL31P41-201ENST00000477967 372 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.47□□□□□ -2.17
COL4A5P29400 AC147055.4-201ENST00000504399 745 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 BOLA3P3-201ENST00000505182 232 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.47□□□□□ -2.17
COL4A5P29400 RNA5SP471-201ENST00000516971 106 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 BTF3P12-201ENST00000519620 469 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.47□□□□□ -2.17
COL4A5P29400 AC090502.2-201ENST00000549267 280 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 AC125611.2-201ENST00000551907 647 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 DUXAP11-201ENST00000603858 526 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 AC079395.3-201ENST00000615161 484 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 AC012640.5-201ENST00000623897 319 ntBASIC1.47□□□□□ -2.17
COL4A5P29400 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.47□□□□□ -2.17
COL4A5P29400 AC005832.2-201ENST00000538921 1430 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 MIR373-201ENST00000362273 69 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 SNORA68.1-201ENST00000364537 132 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 RNU1-52P-201ENST00000384190 164 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 Y_RNA.458-201ENST00000384240 102 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 RNU6-796P-201ENST00000391086 107 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 AC007560.1-201ENST00000426912 237 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.46□□□□□ -2.18
COL4A5P29400 AL139109.1-201ENST00000455491 297 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 SUMO2P2-201ENST00000456482 255 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 PNPLA4P1-201ENST00000458328 305 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.46□□□□□ -2.18
COL4A5P29400 AC087588.1-201ENST00000462203 316 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.46□□□□□ -2.18
COL4A5P29400 AC006499.2-201ENST00000513470 337 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 SETP7-201ENST00000552169 453 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.46□□□□□ -2.18
COL4A5P29400 ANP32BP3-201ENST00000559213 706 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
COL4A5P29400 AP002906.1-201ENST00000603405 233 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 MIR6840-201ENST00000611937 71 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 AL592148.2-201ENST00000612210 372 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 AC073592.7-201ENST00000623659 507 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 OR5H6-203ENST00000642105 978 ntBASIC1.46□□□□□ -2.18
COL4A5P29400 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
COL4A5P29400 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.46□□□□□ -2.18
COL4A5P29400 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.46□□□□□ -2.18
COL4A5P29400 RNU6-1155P-201ENST00000363554 107 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 RNU1-133P-201ENST00000364867 167 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 RNU6-619P-201ENST00000365146 108 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 VN1R42P-201ENST00000424651 344 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 PSMA6P3-201ENST00000428242 164 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.45□□□□□ -2.18
COL4A5P29400 OSTCP8-201ENST00000445117 448 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.45□□□□□ -2.18
COL4A5P29400 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
COL4A5P29400 AL050341.1-201ENST00000447743 313 ntBASIC1.45□□□□□ -2.18
COL4A5P29400 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms