Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 MTCO1P53-201ENST00000441633 699 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 IPO7P1-201ENST00000442031 636 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 KATNBL1P3-201ENST00000443475 909 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 SEPT14P24-201ENST00000447236 180 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 NCOR1P1-202ENST00000486162 291 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.71□□□□□ -2.14
COL5A3P25940 AC113420.1-201ENST00000507903 571 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 AC010460.2-201ENST00000509054 677 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 AF131216.2-201ENST00000512316 564 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 DEFB130C-202ENST00000530001 230 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 AC016957.1-201ENST00000534895 309 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 AC011604.1-201ENST00000545978 196 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A3P25940 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.71□□□□□ -2.14
COL5A3P25940 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A3P25940 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL5A3P25940 MIR5708-201ENST00000579723 85 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.71□□□□□ -2.14
COL5A3P25940 RNU4-5P-201ENST00000607255 135 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 AC010975.3-201ENST00000618727 978 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 AC084824.4-201ENST00000620106 731 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 AC090772.4-201ENST00000623599 362 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 ZNF663P-202ENST00000641770 1131 ntBASIC1.71□□□□□ -2.14
COL5A3P25940 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL5A3P25940 snoZ40.1-201ENST00000364540 72 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 RNU6-1080P-201ENST00000383982 107 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 SNORA51.6-201ENST00000384151 125 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 RNU4-78P-201ENST00000410940 126 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.7□□□□□ -2.14
COL5A3P25940 MTATP6P4-201ENST00000427725 675 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 MTCYBP32-201ENST00000427945 1084 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 RPL31P54-201ENST00000429803 370 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 RPS6P15-201ENST00000431996 751 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.7□□□□□ -2.14
COL5A3P25940 AL031313.1-201ENST00000448435 256 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 RFC5P1-201ENST00000454419 874 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.7□□□□□ -2.14
COL5A3P25940 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
COL5A3P25940 RNU6-415P-201ENST00000516252 97 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 RNU6-1223P-201ENST00000517124 104 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A3P25940 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.7□□□□□ -2.14
COL5A3P25940 OR4R1P-201ENST00000529879 463 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.7□□□□□ -2.14
COL5A3P25940 MTND3P13-201ENST00000574391 343 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.7□□□□□ -2.14
COL5A3P25940 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.7□□□□□ -2.14
COL5A3P25940 GAS5-AS1-201ENST00000602767 694 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 XIAPP1-201ENST00000603162 600 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 AP000240.1-201ENST00000609910 452 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 AL590282.1-201ENST00000610379 1136 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 MIR6078-201ENST00000611069 100 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 AC005332.6-201ENST00000613178 446 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 OR4G3P-201ENST00000633500 913 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 OR4G11P-202ENST00000642116 1414 ntBASIC1.7□□□□□ -2.14
COL5A3P25940 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL5A3P25940 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL5A3P25940 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL5A3P25940 RNU4-51P-201ENST00000364206 140 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 RNU6-173P-201ENST00000364215 104 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A3P25940 MT-TC-201ENST00000387405 66 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AL133264.1-201ENST00000407157 562 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL5A3P25940 RAC1P8-201ENST00000427086 527 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 MTND2P29-201ENST00000438595 412 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A3P25940 AC004022.1-201ENST00000447766 1066 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
COL5A3P25940 AC079776.3-201ENST00000450665 370 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.69□□□□□ -2.14
COL5A3P25940 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A3P25940 RNA5SP476-201ENST00000516613 103 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A3P25940 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A3P25940 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.69□□□□□ -2.14
COL5A3P25940 MIR4666A-201ENST00000580160 79 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.69□□□□□ -2.14
COL5A3P25940 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A3P25940 AC002487.1-201ENST00000604565 994 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A3P25940 AL592148.2-201ENST00000612210 372 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC068831.7-201ENST00000616954 363 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC109454.4-201ENST00000623411 649 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AL078595.3-201ENST00000623815 1166 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC079597.1-201ENST00000624306 508 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC099654.7-201ENST00000635788 2127 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
COL5A3P25940 RNU6-492P-201ENST00000363035 104 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
COL5A3P25940 RNU6-224P-201ENST00000384055 107 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 MIR217-201ENST00000384817 110 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AL121978.1-201ENST00000402778 359 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 MTCO2P8-201ENST00000412213 658 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A3P25940 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A3P25940 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.69□□□□□ -2.14
COL5A3P25940 GTF2IP3-201ENST00000433887 494 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A3P25940 RABEPKP1-201ENST00000440529 1026 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms