Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 SNORA44-201ENST00000384584 132 ntBASIC3.21□□□□□ -1.9
BDNFP23560 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
BDNFP23560 Y_RNA.608-201ENST00000410647 95 ntBASIC3.21□□□□□ -1.9
BDNFP23560 RPL32P35-201ENST00000415214 394 ntBASIC3.21□□□□□ -1.9
BDNFP23560 AC093151.1-201ENST00000427711 313 ntBASIC3.21□□□□□ -1.9
BDNFP23560 FABP5P14-201ENST00000437273 393 ntBASIC3.21□□□□□ -1.9
BDNFP23560 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.21□□□□□ -1.9
BDNFP23560 AL139824.2-201ENST00000458731 1095 ntBASIC3.21□□□□□ -1.9
BDNFP23560 AC080013.2-201ENST00000460866 323 ntBASIC3.21□□□□□ -1.9
BDNFP23560 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.21□□□□□ -1.9
BDNFP23560 AC139453.3-201ENST00000493276 369 ntBASIC3.21□□□□□ -1.9
BDNFP23560 AC080014.1-201ENST00000496877 1201 ntBASIC3.21□□□□□ -1.9
BDNFP23560 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BDNFP23560 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.21□□□□□ -1.9
BDNFP23560 RNU6-1315P-201ENST00000517187 99 ntBASIC3.21□□□□□ -1.9
BDNFP23560 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.21□□□□□ -1.9
BDNFP23560 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.21□□□□□ -1.9
BDNFP23560 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.21□□□□□ -1.9
BDNFP23560 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.21□□□□□ -1.9
BDNFP23560 LINC00933-203ENST00000559812 219 ntBASIC3.21□□□□□ -1.9
BDNFP23560 MIR3118-1-201ENST00000581787 76 ntBASIC3.21□□□□□ -1.9
BDNFP23560 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.21□□□□□ -1.9
BDNFP23560 AF131215.7-201ENST00000602443 707 ntBASIC3.21□□□□□ -1.9
BDNFP23560 AL031775.1-201ENST00000607014 887 ntBASIC3.21□□□□□ -1.9
BDNFP23560 AC022893.3-201ENST00000607665 437 ntBASIC3.21□□□□□ -1.9
BDNFP23560 AC009878.1-201ENST00000621819 340 ntBASIC3.21□□□□□ -1.9
BDNFP23560 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.21□□□□□ -1.9
BDNFP23560 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
BDNFP23560 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.21□□□□□ -1.9
BDNFP23560 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
BDNFP23560 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BDNFP23560 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.2□□□□□ -1.9
BDNFP23560 BX276092.3-201ENST00000424182 230 ntBASIC3.2□□□□□ -1.9
BDNFP23560 AC022018.1-201ENST00000430685 241 ntBASIC3.2□□□□□ -1.9
BDNFP23560 RPL23AP22-201ENST00000437556 453 ntBASIC3.2□□□□□ -1.9
BDNFP23560 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.2□□□□□ -1.9
BDNFP23560 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.2□□□□□ -1.9
BDNFP23560 BTF3P15-201ENST00000455606 336 ntBASIC3.2□□□□□ -1.9
BDNFP23560 AP000797.1-201ENST00000478870 387 ntBASIC3.2□□□□□ -1.9
BDNFP23560 RNU6-1129P-201ENST00000515964 104 ntBASIC3.2□□□□□ -1.9
BDNFP23560 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.2□□□□□ -1.9
BDNFP23560 AC106782.4-201ENST00000568264 210 ntBASIC3.2□□□□□ -1.9
BDNFP23560 AC073544.2-201ENST00000601155 540 ntBASIC3.2□□□□□ -1.9
BDNFP23560 AC069294.1-201ENST00000608397 350 ntBASIC3.2□□□□□ -1.9
BDNFP23560 AL391813.2-201ENST00000609113 322 ntBASIC3.2□□□□□ -1.9
BDNFP23560 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BDNFP23560 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BDNFP23560 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
BDNFP23560 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
BDNFP23560 AC073325.2-201ENST00000339545 159 ntBASIC3.19□□□□□ -1.9
BDNFP23560 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
BDNFP23560 RNU6-188P-201ENST00000364207 107 ntBASIC3.19□□□□□ -1.9
BDNFP23560 RNU6-1280P-201ENST00000365211 107 ntBASIC3.19□□□□□ -1.9
BDNFP23560 RNU6-395P-201ENST00000365662 106 ntBASIC3.19□□□□□ -1.9
BDNFP23560 RNU6-946P-201ENST00000383878 107 ntBASIC3.19□□□□□ -1.9
BDNFP23560 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.19□□□□□ -1.9
BDNFP23560 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.19□□□□□ -1.9
BDNFP23560 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.19□□□□□ -1.9
BDNFP23560 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.19□□□□□ -1.9
BDNFP23560 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.19□□□□□ -1.9
BDNFP23560 MTCO3P30-201ENST00000426425 670 ntBASIC3.19□□□□□ -1.9
BDNFP23560 MTND5P25-201ENST00000430499 799 ntBASIC3.19□□□□□ -1.9
BDNFP23560 COX6CP2-201ENST00000444980 225 ntBASIC3.19□□□□□ -1.9
BDNFP23560 RNU7-26P-201ENST00000458980 63 ntBASIC3.19□□□□□ -1.9
BDNFP23560 AC117440.1-201ENST00000474107 571 ntBASIC3.19□□□□□ -1.9
BDNFP23560 RN7SL20P-201ENST00000488827 297 ntBASIC3.19□□□□□ -1.9
BDNFP23560 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.19□□□□□ -1.9
BDNFP23560 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.19□□□□□ -1.9
BDNFP23560 RNU6-572P-201ENST00000516724 80 ntBASIC3.19□□□□□ -1.9
BDNFP23560 AC068657.1-201ENST00000520807 306 ntBASIC3.19□□□□□ -1.9
BDNFP23560 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.19□□□□□ -1.9
BDNFP23560 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.19□□□□□ -1.9
BDNFP23560 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.19□□□□□ -1.9
BDNFP23560 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.19□□□□□ -1.9
BDNFP23560 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.19□□□□□ -1.9
BDNFP23560 AC135628.1-201ENST00000568867 534 ntBASIC3.19□□□□□ -1.9
BDNFP23560 AC005261.5-201ENST00000596280 355 ntBASIC3.19□□□□□ -1.9
BDNFP23560 RPL12P50-201ENST00000603116 116 ntBASIC3.19□□□□□ -1.9
BDNFP23560 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.19□□□□□ -1.9
BDNFP23560 ATP1B3P1-201ENST00000605365 821 ntBASIC3.19□□□□□ -1.9
BDNFP23560 AL021997.1-201ENST00000605757 193 ntBASIC3.19□□□□□ -1.9
BDNFP23560 AL359547.2-201ENST00000615810 418 ntBASIC3.19□□□□□ -1.9
BDNFP23560 MIR6134-201ENST00000617606 109 ntBASIC3.19□□□□□ -1.9
BDNFP23560 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.19□□□□□ -1.9
BDNFP23560 AC000403.1-201ENST00000613696 3585 ntBASIC3.19□□□□□ -1.9
BDNFP23560 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BDNFP23560 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
BDNFP23560 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.18□□□□□ -1.9
BDNFP23560 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
BDNFP23560 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BDNFP23560 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.18□□□□□ -1.9
BDNFP23560 MTCO2P17-201ENST00000424336 677 ntBASIC3.18□□□□□ -1.9
BDNFP23560 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.18□□□□□ -1.9
BDNFP23560 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.18□□□□□ -1.9
BDNFP23560 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.18□□□□□ -1.9
BDNFP23560 AL078601.1-201ENST00000444542 271 ntBASIC3.18□□□□□ -1.9
BDNFP23560 USP9YP12-201ENST00000450481 570 ntBASIC3.18□□□□□ -1.9
BDNFP23560 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.18□□□□□ -1.9
BDNFP23560 AC004263.1-201ENST00000479327 332 ntBASIC3.18□□□□□ -1.9
BDNFP23560 AC091826.1-201ENST00000514065 313 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms