Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL670379.12-201ENST00000605291 253 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AL670379.8-201ENST00000605353 252 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AL670379.7-201ENST00000605823 252 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC108747.1-201ENST00000609508 535 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC007490.1-201ENST00000624321 703 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 U6.99-201ENST00000637524 83 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 LRRC77P-213ENST00000637727 880 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 MTND4P35-201ENST00000604257 1375 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 Y_RNA.97-201ENST00000363094 102 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 RNU1-112P-201ENST00000364401 164 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 RNU6-817P-201ENST00000391083 104 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AL592148.1-201ENST00000413568 445 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 RPS27AP14-201ENST00000422868 454 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 RPL22P17-201ENST00000438729 315 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AL606662.1-201ENST00000445763 553 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 RNU6-953P-201ENST00000459154 107 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 RPS27AP9-201ENST00000477681 438 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 RN7SL432P-201ENST00000484057 298 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 RNU6-201P-201ENST00000517100 61 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AP003461.1-201ENST00000528866 78 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AC079600.2-201ENST00000550076 130 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 VN1R90P-201ENST00000595717 726 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AL358072.1-201ENST00000604156 575 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AC091152.3-201ENST00000604227 325 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AP000240.1-201ENST00000609910 452 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 uc_338.12-201ENST00000616344 181 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AL589994.2-201ENST00000621124 579 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 FRG1KP-201ENST00000623592 341 ntBASIC2.71□□□□□ -1.98
HLA-DPA1P20036 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DPA1P20036 AC004944.1-201ENST00000517807 3059 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DPA1P20036 SNORA38-201ENST00000363946 132 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 RNU4-28P-201ENST00000364739 141 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 RPL23AP39-201ENST00000415533 405 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC098592.1-201ENST00000419352 333 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AL353777.1-201ENST00000425552 326 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 MICF-203ENST00000432679 129 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 GDI2P2-201ENST00000445131 608 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 MRPL50P4-201ENST00000446432 475 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AL606517.1-201ENST00000446914 387 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DPA1P20036 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DPA1P20036 ELOCP32-201ENST00000548625 324 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 ARL2BPP2-201ENST00000550907 489 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 ISCA1P3-201ENST00000577104 373 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 MIR4635-201ENST00000583759 79 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC008121.1-201ENST00000603244 268 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC104763.2-201ENST00000604179 382 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AP000860.1-201ENST00000605250 559 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC121334.2-201ENST00000605387 271 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AL021997.1-201ENST00000605757 193 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC144521.1-201ENST00000607148 956 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AL449363.1-201ENST00000617815 186 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DPA1P20036 MIR7157-201ENST00000635801 60 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 AC092447.7-201ENST00000422212 1621 ntBASIC2.7□□□□□ -1.98
HLA-DPA1P20036 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 RNU6-809P-201ENST00000384461 107 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 RNU6-19P-201ENST00000384718 107 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 AL360182.1-201ENST00000397433 468 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 RNU2-36P-201ENST00000410361 191 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 HMGN2P35-201ENST00000412164 270 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 RPS12P24-201ENST00000412619 387 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 AL096701.2-201ENST00000416920 238 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 AC006366.1-201ENST00000422002 759 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 RNA5SP356-201ENST00000515972 94 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 SCARNA3-201ENST00000517097 143 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms