Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL353748.1-201ENST00000440753 474 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 RPL35AP15-201ENST00000468042 339 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC3P19447 AC092436.3-201ENST00000511788 257 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC3P19447 AC009902.1-201ENST00000519351 183 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 APOOP3-201ENST00000536787 586 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 MTND6P33-201ENST00000571794 183 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 MIR5690-201ENST00000583739 73 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 AC080078.3-201ENST00000605407 463 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 FAM27D1-201ENST00000612308 341 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 AL110115.1-201ENST00000614396 364 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 PISRT1.1-201ENST00000616930 107 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC3P19447 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
ERCC3P19447 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
ERCC3P19447 AC011266.1-201ENST00000624119 3569 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ERCC3P19447 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
ERCC3P19447 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ERCC3P19447 AC005183.1-201ENST00000603687 1979 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ERCC3P19447 FTLP6-201ENST00000355274 422 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-37P-201ENST00000362692 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 SNORA63-201ENST00000363450 132 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-11P-201ENST00000364234 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-7-201ENST00000364784 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 Y_RNA.315-201ENST00000365117 102 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-8-201ENST00000365467 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-25P-201ENST00000383873 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-1-201ENST00000383898 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-48P-201ENST00000384161 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-36P-201ENST00000384172 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-4P-201ENST00000384205 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-5P-201ENST00000384238 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-3P-201ENST00000384314 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 Y_RNA.482-201ENST00000384377 111 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-16P-201ENST00000384385 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-15P-201ENST00000384534 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-2-201ENST00000384627 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-29P-201ENST00000384637 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-9-201ENST00000384776 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-33P-201ENST00000384793 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNY4P36-201ENST00000391116 96 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 AL360182.1-201ENST00000397433 468 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 AL031274.1-201ENST00000450334 232 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 MRPS31P2-201ENST00000451581 518 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.95□□□□□ -1.62
ERCC3P19447 HMGN2P16-201ENST00000456802 261 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.95□□□□□ -1.62
ERCC3P19447 SYF2P1-201ENST00000550658 413 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 MIR4644-201ENST00000579929 84 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 AL160290.3-201ENST00000604869 165 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 RNU6-6P-201ENST00000606623 107 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.95□□□□□ -1.62
ERCC3P19447 MIR7154-201ENST00000620673 73 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 AC027309.3-201ENST00000623419 351 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ERCC3P19447 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.95□□□□□ -1.62
ERCC3P19447 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ERCC3P19447 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ERCC3P19447 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.95□□□□□ -1.62
ERCC3P19447 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
ERCC3P19447 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.95□□□□□ -1.62
ERCC3P19447 AF127577.6-201ENST00000623352 2191 ntBASIC4.95□□□□□ -1.62
ERCC3P19447 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ERCC3P19447 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.95□□□□□ -1.62
ERCC3P19447 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
ERCC3P19447 AL359693.1-201ENST00000614959 2407 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
ERCC3P19447 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ERCC3P19447 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ERCC3P19447 RNA5SP130-201ENST00000364431 114 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 RNU6-306P-201ENST00000384617 107 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AL592148.1-201ENST00000413568 445 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AC093151.1-201ENST00000427711 313 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.94□□□□□ -1.62
ERCC3P19447 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.94□□□□□ -1.62
ERCC3P19447 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.94□□□□□ -1.62
ERCC3P19447 BRK1P2-201ENST00000442875 223 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AL078601.1-201ENST00000444542 271 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ERCC3P19447 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ERCC3P19447 Y_RNA.653-201ENST00000459091 95 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AC084357.1-201ENST00000473404 255 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AL135752.1-201ENST00000479477 471 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AC027575.1-201ENST00000481064 460 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AC018437.1-201ENST00000492214 406 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AC099522.1-202ENST00000514718 367 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 RNU6-1282P-201ENST00000516735 96 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.94□□□□□ -1.62
ERCC3P19447 IMMP1LP2-201ENST00000552954 492 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 ANP32BP3-201ENST00000559213 706 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.94□□□□□ -1.62
ERCC3P19447 MIR4429-201ENST00000580105 73 ntBASIC4.94□□□□□ -1.62
ERCC3P19447 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.94□□□□□ -1.62
ERCC3P19447 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.94□□□□□ -1.62
ERCC3P19447 ELOCP5-201ENST00000604924 333 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms