Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNU6-874P-201ENST00000362390 105 ntBASIC4.95□□□□□ -1.62
LIG1P18858 SNORD74.4-201ENST00000364129 80 ntBASIC4.95□□□□□ -1.62
LIG1P18858 Y_RNA.424-201ENST00000384063 103 ntBASIC4.95□□□□□ -1.62
LIG1P18858 RNU6-842P-201ENST00000384269 107 ntBASIC4.95□□□□□ -1.62
LIG1P18858 RNU6-14P-201ENST00000384630 106 ntBASIC4.95□□□□□ -1.62
LIG1P18858 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.95□□□□□ -1.62
LIG1P18858 TMSB10P2-201ENST00000416049 131 ntBASIC4.95□□□□□ -1.62
LIG1P18858 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.95□□□□□ -1.62
LIG1P18858 C4BPAP2-201ENST00000428434 478 ntBASIC4.95□□□□□ -1.62
LIG1P18858 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.95□□□□□ -1.62
LIG1P18858 AC011816.1-201ENST00000441346 546 ntBASIC4.95□□□□□ -1.62
LIG1P18858 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.95□□□□□ -1.62
LIG1P18858 RPL35AP15-201ENST00000468042 339 ntBASIC4.95□□□□□ -1.62
LIG1P18858 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIG1P18858 AC104164.2-201ENST00000496953 495 ntBASIC4.95□□□□□ -1.62
LIG1P18858 AC025554.1-201ENST00000505641 188 ntBASIC4.95□□□□□ -1.62
LIG1P18858 SLC25A15P5-201ENST00000508033 253 ntBASIC4.95□□□□□ -1.62
LIG1P18858 AC092436.3-201ENST00000511788 257 ntBASIC4.95□□□□□ -1.62
LIG1P18858 RNA5SP73-201ENST00000516744 108 ntBASIC4.95□□□□□ -1.62
LIG1P18858 AP003385.6-201ENST00000531603 374 ntBASIC4.95□□□□□ -1.62
LIG1P18858 Z98751.3-201ENST00000604447 521 ntBASIC4.95□□□□□ -1.62
LIG1P18858 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIG1P18858 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LIG1P18858 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIG1P18858 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
LIG1P18858 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LIG1P18858 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.94□□□□□ -1.62
LIG1P18858 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.94□□□□□ -1.62
LIG1P18858 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIG1P18858 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.94□□□□□ -1.62
LIG1P18858 RNU6-1059P-201ENST00000363752 98 ntBASIC4.94□□□□□ -1.62
LIG1P18858 SNORA23-201ENST00000365128 182 ntBASIC4.94□□□□□ -1.62
LIG1P18858 Y_RNA.480-201ENST00000384364 102 ntBASIC4.94□□□□□ -1.62
LIG1P18858 RNU6-45P-201ENST00000384471 107 ntBASIC4.94□□□□□ -1.62
LIG1P18858 Y_RNA.512-201ENST00000384518 102 ntBASIC4.94□□□□□ -1.62
LIG1P18858 MIR1250-201ENST00000408098 113 ntBASIC4.94□□□□□ -1.62
LIG1P18858 RNU2-3P-201ENST00000410144 191 ntBASIC4.94□□□□□ -1.62
LIG1P18858 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.94□□□□□ -1.62
LIG1P18858 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.94□□□□□ -1.62
LIG1P18858 AC092809.3-201ENST00000415453 231 ntBASIC4.94□□□□□ -1.62
LIG1P18858 MRPS18CP6-201ENST00000423587 223 ntBASIC4.94□□□□□ -1.62
LIG1P18858 RPL18P10-201ENST00000425606 538 ntBASIC4.94□□□□□ -1.62
LIG1P18858 RPL23AP50-201ENST00000434149 455 ntBASIC4.94□□□□□ -1.62
LIG1P18858 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.94□□□□□ -1.62
LIG1P18858 AL353752.1-201ENST00000454946 260 ntBASIC4.94□□□□□ -1.62
LIG1P18858 RPS23P3-201ENST00000470993 430 ntBASIC4.94□□□□□ -1.62
LIG1P18858 HIGD1AP3-201ENST00000515857 278 ntBASIC4.94□□□□□ -1.62
LIG1P18858 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LIG1P18858 MIR5096-201ENST00000583713 70 ntBASIC4.94□□□□□ -1.62
LIG1P18858 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.94□□□□□ -1.62
LIG1P18858 AC012119.1-201ENST00000603184 222 ntBASIC4.94□□□□□ -1.62
LIG1P18858 AC016727.2-201ENST00000603988 621 ntBASIC4.94□□□□□ -1.62
LIG1P18858 IGHV3-29-201ENST00000604817 344 ntBASIC4.94□□□□□ -1.62
LIG1P18858 AC007619.2-201ENST00000605743 379 ntBASIC4.94□□□□□ -1.62
LIG1P18858 AC012603.1-201ENST00000606424 528 ntBASIC4.94□□□□□ -1.62
LIG1P18858 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LIG1P18858 MIR8062-201ENST00000621515 85 ntBASIC4.94□□□□□ -1.62
LIG1P18858 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIG1P18858 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
LIG1P18858 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIG1P18858 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.94□□□□□ -1.62
LIG1P18858 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.94□□□□□ -1.62
LIG1P18858 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIG1P18858 MTND5P7-201ENST00000413558 1798 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AC006971.1-201ENST00000407916 4486 ntBASIC4.93□□□□□ -1.62
LIG1P18858 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIG1P18858 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIG1P18858 RNA5SP189-201ENST00000364920 115 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AL590704.1-201ENST00000402856 794 ntBASIC4.93□□□□□ -1.62
LIG1P18858 MIR1252-201ENST00000408861 65 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AC096664.2-201ENST00000411843 406 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AL356968.1-201ENST00000416622 474 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.93□□□□□ -1.62
LIG1P18858 AL160275.3-201ENST00000423876 471 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AC011998.1-201ENST00000433403 117 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.93□□□□□ -1.62
LIG1P18858 AL353748.1-201ENST00000440753 474 ntBASIC4.93□□□□□ -1.62
LIG1P18858 OSTCP8-201ENST00000445117 448 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AL451050.1-201ENST00000450126 415 ntBASIC4.93□□□□□ -1.62
LIG1P18858 PCNPP5-201ENST00000452246 481 ntBASIC4.93□□□□□ -1.62
LIG1P18858 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.93□□□□□ -1.62
LIG1P18858 RNU7-138P-201ENST00000459479 64 ntBASIC4.93□□□□□ -1.62
LIG1P18858 RPL37P6-201ENST00000460682 294 ntBASIC4.93□□□□□ -1.62
LIG1P18858 VN1R105P-201ENST00000486595 910 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AC078918.1-201ENST00000498515 228 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AC005921.1-201ENST00000510589 286 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AC093840.1-201ENST00000511599 336 ntBASIC4.93□□□□□ -1.62
LIG1P18858 RNU6-390P-201ENST00000516259 103 ntBASIC4.93□□□□□ -1.62
LIG1P18858 AC131281.1-201ENST00000522984 164 ntBASIC4.93□□□□□ -1.62
LIG1P18858 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.93□□□□□ -1.62
LIG1P18858 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.93□□□□□ -1.62
LIG1P18858 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.93□□□□□ -1.62
LIG1P18858 AC064801.1-201ENST00000612025 407 ntBASIC4.93□□□□□ -1.62
LIG1P18858 U73479.1-201ENST00000618062 168 ntBASIC4.93□□□□□ -1.62
LIG1P18858 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.93□□□□□ -1.62
LIG1P18858 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
LIG1P18858 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.93□□□□□ -1.62
LIG1P18858 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIG1P18858 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.93□□□□□ -1.62
LIG1P18858 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms