Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 SNORD97-201ENST00000459187 142 ntBASIC2.46□□□□□ -2.02
SDC1P18827 AC133134.1-201ENST00000466800 359 ntBASIC2.46□□□□□ -2.02
SDC1P18827 RPS29P20-201ENST00000489592 171 ntBASIC2.46□□□□□ -2.02
SDC1P18827 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.46□□□□□ -2.02
SDC1P18827 DSTNP2-201ENST00000504533 515 ntBASIC2.46□□□□□ -2.02
SDC1P18827 AC010587.1-201ENST00000505809 469 ntBASIC2.46□□□□□ -2.02
SDC1P18827 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.46□□□□□ -2.02
SDC1P18827 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.46□□□□□ -2.02
SDC1P18827 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.46□□□□□ -2.02
SDC1P18827 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
SDC1P18827 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.46□□□□□ -2.02
SDC1P18827 CKS1BP7-201ENST00000522230 235 ntBASIC2.46□□□□□ -2.02
SDC1P18827 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SDC1P18827 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.46□□□□□ -2.02
SDC1P18827 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SDC1P18827 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
SDC1P18827 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.46□□□□□ -2.02
SDC1P18827 RPL21P5-201ENST00000554662 472 ntBASIC2.46□□□□□ -2.02
SDC1P18827 RPS3AP4-201ENST00000555161 764 ntBASIC2.46□□□□□ -2.02
SDC1P18827 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.46□□□□□ -2.02
SDC1P18827 AC012414.6-201ENST00000568241 401 ntBASIC2.46□□□□□ -2.02
SDC1P18827 MIR3670-2-201ENST00000582974 65 ntBASIC2.46□□□□□ -2.02
SDC1P18827 MIR5092-201ENST00000583139 88 ntBASIC2.46□□□□□ -2.02
SDC1P18827 MIR3670-1-201ENST00000584160 65 ntBASIC2.46□□□□□ -2.02
SDC1P18827 MIR3670-3-201ENST00000584855 65 ntBASIC2.46□□□□□ -2.02
SDC1P18827 HMGN2P15-201ENST00000585707 270 ntBASIC2.46□□□□□ -2.02
SDC1P18827 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.46□□□□□ -2.02
SDC1P18827 AL358072.1-201ENST00000604156 575 ntBASIC2.46□□□□□ -2.02
SDC1P18827 AC007363.1-201ENST00000604736 620 ntBASIC2.46□□□□□ -2.02
SDC1P18827 AC121247.2-201ENST00000604776 136 ntBASIC2.46□□□□□ -2.02
SDC1P18827 MTND4LP5-201ENST00000605152 292 ntBASIC2.46□□□□□ -2.02
SDC1P18827 AC004805.2-201ENST00000605382 482 ntBASIC2.46□□□□□ -2.02
SDC1P18827 MIR3670-4-201ENST00000612260 65 ntBASIC2.46□□□□□ -2.02
SDC1P18827 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.46□□□□□ -2.02
SDC1P18827 AC078883.4-201ENST00000623218 367 ntBASIC2.46□□□□□ -2.02
SDC1P18827 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.46□□□□□ -2.02
SDC1P18827 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
SDC1P18827 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SDC1P18827 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SDC1P18827 UBE2L2-201ENST00000254302 429 ntBASIC2.45□□□□□ -2.02
SDC1P18827 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.45□□□□□ -2.02
SDC1P18827 RNU5E-1-201ENST00000362477 120 ntBASIC2.45□□□□□ -2.02
SDC1P18827 RNU6-884P-201ENST00000363889 107 ntBASIC2.45□□□□□ -2.02
SDC1P18827 SNORA25.6-201ENST00000364121 118 ntBASIC2.45□□□□□ -2.02
SDC1P18827 RNA5SP139-201ENST00000364340 117 ntBASIC2.45□□□□□ -2.02
SDC1P18827 RNU6-512P-201ENST00000364438 103 ntBASIC2.45□□□□□ -2.02
SDC1P18827 RNU5E-6P-201ENST00000365574 115 ntBASIC2.45□□□□□ -2.02
SDC1P18827 DEFA7P-201ENST00000382676 285 ntBASIC2.45□□□□□ -2.02
SDC1P18827 MIR128-1-201ENST00000384921 82 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 AC006366.1-201ENST00000422002 759 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.45□□□□□ -2.02
SDC1P18827 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AL589872.1-201ENST00000426602 288 ntBASIC2.45□□□□□ -2.02
SDC1P18827 SNRPEP9-201ENST00000436794 238 ntBASIC2.45□□□□□ -2.02
SDC1P18827 PGBD4P3-201ENST00000440731 581 ntBASIC2.45□□□□□ -2.02
SDC1P18827 NEFMP1-201ENST00000443423 1006 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 RAP1BP2-201ENST00000478270 544 ntBASIC2.45□□□□□ -2.02
SDC1P18827 RN7SL432P-201ENST00000484057 298 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AIG1P1-201ENST00000503376 148 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.45□□□□□ -2.02
SDC1P18827 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 AC118465.1-201ENST00000513820 1271 ntBASIC2.45□□□□□ -2.02
SDC1P18827 RN7SKP132-201ENST00000516001 208 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 AC243972.3-201ENST00000539655 198 ntBASIC2.45□□□□□ -2.02
SDC1P18827 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 AC008088.1-201ENST00000580993 280 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AL451007.1-201ENST00000595491 289 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AC025811.1-201ENST00000604312 472 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AC091304.9-201ENST00000612091 226 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.45□□□□□ -2.02
SDC1P18827 AL589994.2-201ENST00000621124 579 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AC022079.1-201ENST00000621546 602 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AL603839.4-201ENST00000624658 1005 ntBASIC2.45□□□□□ -2.02
SDC1P18827 AC025048.6-202ENST00000627667 438 ntBASIC2.45□□□□□ -2.02
SDC1P18827 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.45□□□□□ -2.02
SDC1P18827 AL137790.1-201ENST00000634283 177 ntBASIC2.45□□□□□ -2.02
SDC1P18827 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SDC1P18827 AC099654.7-201ENST00000635788 2127 ntBASIC2.45□□□□□ -2.02
SDC1P18827 MTND5P29-201ENST00000458676 1807 ntBASIC2.45□□□□□ -2.02
SDC1P18827 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SDC1P18827 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.44□□□□□ -2.02
SDC1P18827 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SDC1P18827 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.44□□□□□ -2.02
SDC1P18827 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SDC1P18827 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SDC1P18827 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SDC1P18827 MIR888-201ENST00000401186 77 ntBASIC2.44□□□□□ -2.02
SDC1P18827 AC080125.1-201ENST00000414888 684 ntBASIC2.44□□□□□ -2.02
SDC1P18827 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.44□□□□□ -2.02
SDC1P18827 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.44□□□□□ -2.02
SDC1P18827 ISCA1P1-201ENST00000426679 387 ntBASIC2.44□□□□□ -2.02
SDC1P18827 AC009414.1-201ENST00000427200 443 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms