Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC108075.1-201ENST00000424692 529 ntBASIC6.34□□□□□ -1.39
CD44P16070 NDUFB4P8-201ENST00000435351 367 ntBASIC6.34□□□□□ -1.39
CD44P16070 TIMM8BP2-201ENST00000445940 251 ntBASIC6.34□□□□□ -1.39
CD44P16070 RN7SL57P-201ENST00000493687 290 ntBASIC6.34□□□□□ -1.39
CD44P16070 AC093815.1-201ENST00000508637 280 ntBASIC6.34□□□□□ -1.39
CD44P16070 CYCSP38-201ENST00000559840 322 ntBASIC6.34□□□□□ -1.39
CD44P16070 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC6.34□□□□□ -1.39
CD44P16070 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.34□□□□□ -1.39
CD44P16070 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.34□□□□□ -1.39
CD44P16070 MIR6793-201ENST00000612376 63 ntBASIC6.34□□□□□ -1.39
CD44P16070 AL137067.1-201ENST00000615933 120 ntBASIC6.34□□□□□ -1.39
CD44P16070 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.34□□□□□ -1.39
CD44P16070 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CD44P16070 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CD44P16070 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.34□□□□□ -1.39
CD44P16070 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.34□□□□□ -1.39
CD44P16070 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.34□□□□□ -1.39
CD44P16070 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.4
CD44P16070 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.4
CD44P16070 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CD44P16070 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.33□□□□□ -1.4
CD44P16070 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.33□□□□□ -1.4
CD44P16070 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CD44P16070 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CD44P16070 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CD44P16070 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CD44P16070 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CD44P16070 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CD44P16070 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CD44P16070 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CD44P16070 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC6.33□□□□□ -1.4
CD44P16070 AL159987.1-201ENST00000347911 293 ntBASIC6.33□□□□□ -1.4
CD44P16070 RNA5SP127-201ENST00000411051 133 ntBASIC6.33□□□□□ -1.4
CD44P16070 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.33□□□□□ -1.4
CD44P16070 AC007969.2-201ENST00000441891 191 ntBASIC6.33□□□□□ -1.4
CD44P16070 YRDCP3-201ENST00000456507 480 ntBASIC6.33□□□□□ -1.4
CD44P16070 AC006517.1-201ENST00000480485 328 ntBASIC6.33□□□□□ -1.4
CD44P16070 AC007686.1-201ENST00000488511 463 ntBASIC6.33□□□□□ -1.4
CD44P16070 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.33□□□□□ -1.4
CD44P16070 RNA5SP290-201ENST00000517133 127 ntBASIC6.33□□□□□ -1.4
CD44P16070 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.33□□□□□ -1.4
CD44P16070 AC084121.1-201ENST00000533882 835 ntBASIC6.33□□□□□ -1.4
CD44P16070 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.33□□□□□ -1.4
CD44P16070 AC079905.1-201ENST00000549280 475 ntBASIC6.33□□□□□ -1.4
CD44P16070 AC008507.3-201ENST00000585753 472 ntBASIC6.33□□□□□ -1.4
CD44P16070 AC018809.2-201ENST00000602436 3823 ntBASIC6.33□□□□□ -1.4
CD44P16070 AC097639.2-201ENST00000603159 172 ntBASIC6.33□□□□□ -1.4
CD44P16070 AL021707.8-201ENST00000609428 183 ntBASIC6.33□□□□□ -1.4
CD44P16070 AL359198.2-201ENST00000611836 194 ntBASIC6.33□□□□□ -1.4
CD44P16070 AC015914.2-201ENST00000618167 288 ntBASIC6.33□□□□□ -1.4
CD44P16070 AC245014.3-201ENST00000618589 347 ntBASIC6.33□□□□□ -1.4
CD44P16070 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.33□□□□□ -1.4
CD44P16070 AC010329.1-201ENST00000593903 8328 ntBASIC6.33□□□□□ -1.4
CD44P16070 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.33□□□□□ -1.4
CD44P16070 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CD44P16070 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.33□□□□□ -1.4
CD44P16070 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD44P16070 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD44P16070 AC073073.2-201ENST00000609827 2578 ntBASIC6.32□□□□□ -1.4
CD44P16070 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD44P16070 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CD44P16070 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD44P16070 RNU1-150P-201ENST00000362491 162 ntBASIC6.32□□□□□ -1.4
CD44P16070 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC6.32□□□□□ -1.4
CD44P16070 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC6.32□□□□□ -1.4
CD44P16070 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.32□□□□□ -1.4
CD44P16070 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.32□□□□□ -1.4
CD44P16070 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.32□□□□□ -1.4
CD44P16070 AL389915.2-201ENST00000454576 441 ntBASIC6.32□□□□□ -1.4
CD44P16070 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.32□□□□□ -1.4
CD44P16070 GLUD1P3-202ENST00000508551 200 ntBASIC6.32□□□□□ -1.4
CD44P16070 RNA5SP236-201ENST00000516169 116 ntBASIC6.32□□□□□ -1.4
CD44P16070 SCARNA18.1-201ENST00000516330 83 ntBASIC6.32□□□□□ -1.4
CD44P16070 RNA5SP438-201ENST00000516561 112 ntBASIC6.32□□□□□ -1.4
CD44P16070 AC074050.1-201ENST00000563247 211 ntBASIC6.32□□□□□ -1.4
CD44P16070 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.32□□□□□ -1.4
CD44P16070 AC010401.2-201ENST00000575137 4934 ntBASIC6.32□□□□□ -1.4
CD44P16070 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CD44P16070 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD44P16070 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
CD44P16070 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CD44P16070 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CD44P16070 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD44P16070 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CD44P16070 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD44P16070 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD44P16070 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.31□□□□□ -1.4
CD44P16070 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CD44P16070 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.31□□□□□ -1.4
CD44P16070 RNA5SP477-201ENST00000362639 119 ntBASIC6.31□□□□□ -1.4
CD44P16070 Y_RNA.198-201ENST00000364013 98 ntBASIC6.31□□□□□ -1.4
CD44P16070 MIR514A1-201ENST00000385133 98 ntBASIC6.31□□□□□ -1.4
CD44P16070 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CD44P16070 RNU2-70P-201ENST00000410718 179 ntBASIC6.31□□□□□ -1.4
CD44P16070 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC6.31□□□□□ -1.4
CD44P16070 AC078809.1-201ENST00000427601 140 ntBASIC6.31□□□□□ -1.4
CD44P16070 AC068287.1-201ENST00000430283 295 ntBASIC6.31□□□□□ -1.4
CD44P16070 EIF5AP4-201ENST00000441206 465 ntBASIC6.31□□□□□ -1.4
CD44P16070 AC009963.3-201ENST00000458090 486 ntBASIC6.31□□□□□ -1.4
CD44P16070 RPL23AP67-201ENST00000465341 474 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms