Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 COPS8P3-201ENST00000526024 482 ntBASIC3.61□□□□□ -1.83
PF4V1P10720 DNAJC8P1-201ENST00000554535 372 ntBASIC3.61□□□□□ -1.83
PF4V1P10720 SCOCP1-201ENST00000554676 349 ntBASIC3.61□□□□□ -1.83
PF4V1P10720 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.61□□□□□ -1.83
PF4V1P10720 AC037471.2-201ENST00000564941 598 ntBASIC3.61□□□□□ -1.83
PF4V1P10720 AC025281.1-201ENST00000567026 265 ntBASIC3.61□□□□□ -1.83
PF4V1P10720 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.61□□□□□ -1.83
PF4V1P10720 AL138726.1-201ENST00000614873 333 ntBASIC3.61□□□□□ -1.83
PF4V1P10720 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.61□□□□□ -1.83
PF4V1P10720 RMST_7.1-201ENST00000621935 268 ntBASIC3.61□□□□□ -1.83
PF4V1P10720 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PF4V1P10720 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
PF4V1P10720 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
PF4V1P10720 AC091564.4-201ENST00000533934 2194 ntBASIC3.61□□□□□ -1.83
PF4V1P10720 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PF4V1P10720 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PF4V1P10720 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PF4V1P10720 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.6□□□□□ -1.83
PF4V1P10720 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PF4V1P10720 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PF4V1P10720 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PF4V1P10720 Y_RNA.70-201ENST00000362886 110 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 Y_RNA.142-201ENST00000363491 102 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 RNA5SP139-201ENST00000364340 117 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 RNU6-1280P-201ENST00000365211 107 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 RNU5E-7P-201ENST00000365290 117 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PF4V1P10720 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PF4V1P10720 AL160275.2-201ENST00000412010 394 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.6□□□□□ -1.83
PF4V1P10720 SNORD56-201ENST00000413522 71 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.6□□□□□ -1.83
PF4V1P10720 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.6□□□□□ -1.83
PF4V1P10720 AL353678.1-201ENST00000422735 741 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 AC005019.1-201ENST00000436455 431 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 RPL23AP14-201ENST00000468281 468 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 AC109327.1-201ENST00000471666 403 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.6□□□□□ -1.83
PF4V1P10720 AL049830.2-201ENST00000480072 201 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.6□□□□□ -1.83
PF4V1P10720 MTCO1P29-201ENST00000496868 288 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.6□□□□□ -1.83
PF4V1P10720 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.6□□□□□ -1.83
PF4V1P10720 RNU6-1332P-201ENST00000516666 104 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 AP005597.4-201ENST00000526762 229 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.6□□□□□ -1.83
PF4V1P10720 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.6□□□□□ -1.83
PF4V1P10720 AL121821.2-201ENST00000556081 394 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.6□□□□□ -1.83
PF4V1P10720 AC091135.1-201ENST00000585943 307 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 LARP7P1-201ENST00000605576 316 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 AC009994.1-201ENST00000606889 253 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.6□□□□□ -1.83
PF4V1P10720 AC005858.4-201ENST00000623191 700 ntBASIC3.6□□□□□ -1.83
PF4V1P10720 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PF4V1P10720 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PF4V1P10720 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.6□□□□□ -1.83
PF4V1P10720 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PF4V1P10720 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
PF4V1P10720 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
PF4V1P10720 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PF4V1P10720 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.59□□□□□ -1.83
PF4V1P10720 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PF4V1P10720 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PF4V1P10720 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PF4V1P10720 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PF4V1P10720 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PF4V1P10720 RNU6-1106P-201ENST00000390845 107 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 U3.22-201ENST00000391120 215 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 RNU4-25P-201ENST00000410569 230 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PF4V1P10720 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.59□□□□□ -1.83
PF4V1P10720 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.59□□□□□ -1.83
PF4V1P10720 UBE2V1P4-201ENST00000425374 344 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 RPL21P40-201ENST00000428586 483 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.59□□□□□ -1.83
PF4V1P10720 SNAP23P1-201ENST00000433229 246 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 AC093019.1-201ENST00000443135 252 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 RPL32P28-201ENST00000443577 397 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PF4V1P10720 AC092001.1-201ENST00000453012 261 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 AL136097.1-201ENST00000456945 913 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 RPL23AP45-201ENST00000476406 468 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.59□□□□□ -1.83
PF4V1P10720 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.59□□□□□ -1.83
PF4V1P10720 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.59□□□□□ -1.83
PF4V1P10720 AC114781.4-201ENST00000513707 639 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 RNU6-507P-201ENST00000516045 100 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.59□□□□□ -1.83
PF4V1P10720 AC026371.1-201ENST00000551867 419 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 AC024153.1-201ENST00000603103 365 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.59□□□□□ -1.83
PF4V1P10720 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.59□□□□□ -1.83
PF4V1P10720 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.59□□□□□ -1.83
PF4V1P10720 AC091905.2-201ENST00000623143 306 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 AC008013.2-202ENST00000637965 364 ntBASIC3.59□□□□□ -1.83
PF4V1P10720 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.59□□□□□ -1.84
PF4V1P10720 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
PF4V1P10720 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
PF4V1P10720 MAPK10-253ENST00000641010 4072 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms