Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.36□□□□□ -2.03
RETP07949 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.36□□□□□ -2.03
RETP07949 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.36□□□□□ -2.03
RETP07949 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.36□□□□□ -2.03
RETP07949 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.36□□□□□ -2.03
RETP07949 AC009296.1-201ENST00000443146 155 ntBASIC2.36□□□□□ -2.03
RETP07949 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.36□□□□□ -2.03
RETP07949 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.36□□□□□ -2.03
RETP07949 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.36□□□□□ -2.03
RETP07949 ARPC3P5-201ENST00000448802 534 ntBASIC2.36□□□□□ -2.03
RETP07949 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.36□□□□□ -2.03
RETP07949 USP9YP10-201ENST00000454868 628 ntBASIC2.36□□□□□ -2.03
RETP07949 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.36□□□□□ -2.03
RETP07949 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.36□□□□□ -2.03
RETP07949 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RETP07949 AC117522.2-201ENST00000510049 657 ntBASIC2.36□□□□□ -2.03
RETP07949 AC093281.2-201ENST00000510153 597 ntBASIC2.36□□□□□ -2.03
RETP07949 AC026436.1-201ENST00000510537 270 ntBASIC2.36□□□□□ -2.03
RETP07949 AP003461.1-201ENST00000528866 78 ntBASIC2.36□□□□□ -2.03
RETP07949 PRELID2P1-201ENST00000552837 301 ntBASIC2.36□□□□□ -2.03
RETP07949 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.36□□□□□ -2.03
RETP07949 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.36□□□□□ -2.03
RETP07949 AC010546.1-201ENST00000569391 485 ntBASIC2.36□□□□□ -2.03
RETP07949 AC009127.3-201ENST00000570531 403 ntBASIC2.36□□□□□ -2.03
RETP07949 MIR4658-201ENST00000584344 65 ntBASIC2.36□□□□□ -2.03
RETP07949 AC013553.2-201ENST00000604244 589 ntBASIC2.36□□□□□ -2.03
RETP07949 AL137847.3-201ENST00000611521 109 ntBASIC2.36□□□□□ -2.03
RETP07949 AL139418.1-201ENST00000613613 177 ntBASIC2.36□□□□□ -2.03
RETP07949 AC004852.3-201ENST00000614131 326 ntBASIC2.36□□□□□ -2.03
RETP07949 AC002550.2-201ENST00000621246 394 ntBASIC2.36□□□□□ -2.03
RETP07949 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RETP07949 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.36□□□□□ -2.03
RETP07949 AC022336.2-201ENST00000568966 2538 ntBASIC2.36□□□□□ -2.03
RETP07949 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RETP07949 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
RETP07949 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.35□□□□□ -2.03
RETP07949 AL356292.1-201ENST00000283110 373 ntBASIC2.35□□□□□ -2.03
RETP07949 RNU5E-8P-201ENST00000363502 116 ntBASIC2.35□□□□□ -2.03
RETP07949 RNU6-931P-201ENST00000363850 107 ntBASIC2.35□□□□□ -2.03
RETP07949 SNORA4.1-201ENST00000364263 144 ntBASIC2.35□□□□□ -2.03
RETP07949 RNU1-39P-201ENST00000383897 165 ntBASIC2.35□□□□□ -2.03
RETP07949 RNU4-72P-201ENST00000410754 173 ntBASIC2.35□□□□□ -2.03
RETP07949 RPL23AP36-201ENST00000413895 458 ntBASIC2.35□□□□□ -2.03
RETP07949 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.35□□□□□ -2.03
RETP07949 CCDC58P2-201ENST00000417131 366 ntBASIC2.35□□□□□ -2.03
RETP07949 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.35□□□□□ -2.03
RETP07949 AC018630.2-202ENST00000422992 927 ntBASIC2.35□□□□□ -2.03
RETP07949 PPP1R11P2-201ENST00000423543 382 ntBASIC2.35□□□□□ -2.03
RETP07949 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.35□□□□□ -2.03
RETP07949 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.35□□□□□ -2.03
RETP07949 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.35□□□□□ -2.03
RETP07949 TAAR7P-201ENST00000436141 242 ntBASIC2.35□□□□□ -2.03
RETP07949 AL117351.1-201ENST00000438864 766 ntBASIC2.35□□□□□ -2.03
RETP07949 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.35□□□□□ -2.03
RETP07949 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.35□□□□□ -2.03
RETP07949 AC233279.1-201ENST00000455300 423 ntBASIC2.35□□□□□ -2.03
RETP07949 snoU13.28-201ENST00000459235 104 ntBASIC2.35□□□□□ -2.03
RETP07949 RPL31P41-201ENST00000477967 372 ntBASIC2.35□□□□□ -2.03
RETP07949 RPL36AP51-201ENST00000487216 318 ntBASIC2.35□□□□□ -2.03
RETP07949 MTCYBP35-201ENST00000503630 1137 ntBASIC2.35□□□□□ -2.03
RETP07949 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.35□□□□□ -2.03
RETP07949 BTF3P12-201ENST00000519620 469 ntBASIC2.35□□□□□ -2.03
RETP07949 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.35□□□□□ -2.03
RETP07949 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.35□□□□□ -2.03
RETP07949 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.35□□□□□ -2.03
RETP07949 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.35□□□□□ -2.03
RETP07949 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.35□□□□□ -2.03
RETP07949 AC009094.1-201ENST00000564443 426 ntBASIC2.35□□□□□ -2.03
RETP07949 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.35□□□□□ -2.03
RETP07949 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.35□□□□□ -2.03
RETP07949 AC005951.2-201ENST00000576282 495 ntBASIC2.35□□□□□ -2.03
RETP07949 MIR3117-201ENST00000584034 78 ntBASIC2.35□□□□□ -2.03
RETP07949 MIR3616-201ENST00000584070 92 ntBASIC2.35□□□□□ -2.03
RETP07949 AL645944.1-201ENST00000603857 493 ntBASIC2.35□□□□□ -2.03
RETP07949 AC011451.2-201ENST00000604303 598 ntBASIC2.35□□□□□ -2.03
RETP07949 AL603758.1-201ENST00000618654 241 ntBASIC2.35□□□□□ -2.03
RETP07949 UCA1.1-201ENST00000620952 75 ntBASIC2.35□□□□□ -2.03
RETP07949 AC007490.1-201ENST00000624321 703 ntBASIC2.35□□□□□ -2.03
RETP07949 OR5H6-203ENST00000642105 978 ntBASIC2.35□□□□□ -2.03
RETP07949 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RETP07949 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RETP07949 DDX43P2-201ENST00000604753 1354 ntBASIC2.35□□□□□ -2.03
RETP07949 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
RETP07949 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.03
RETP07949 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RETP07949 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RETP07949 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RETP07949 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RETP07949 RNU6-97P-201ENST00000363387 104 ntBASIC2.34□□□□□ -2.03
RETP07949 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RETP07949 RNU6-14P-201ENST00000384630 106 ntBASIC2.34□□□□□ -2.03
RETP07949 RNU6-114P-201ENST00000384704 105 ntBASIC2.34□□□□□ -2.03
RETP07949 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RETP07949 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RETP07949 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.34□□□□□ -2.03
RETP07949 NDUFB4P7-201ENST00000423198 363 ntBASIC2.34□□□□□ -2.03
RETP07949 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.34□□□□□ -2.03
RETP07949 TXNL1P1-201ENST00000429528 554 ntBASIC2.34□□□□□ -2.03
RETP07949 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.34□□□□□ -2.03
RETP07949 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms