Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.86□□□□□ -2.11
TPM3P06753 SNORA11-201ENST00000408789 128 ntBASIC1.86□□□□□ -2.11
TPM3P06753 RNA5SP450-201ENST00000411206 102 ntBASIC1.86□□□□□ -2.11
TPM3P06753 RN7SKP192-201ENST00000411291 327 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.86□□□□□ -2.11
TPM3P06753 RPL23AP39-201ENST00000415533 405 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AC244636.1-201ENST00000421152 228 ntBASIC1.86□□□□□ -2.11
TPM3P06753 MTCO2P5-201ENST00000422621 426 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AL139421.1-201ENST00000423010 169 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM3P06753 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM3P06753 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.86□□□□□ -2.11
TPM3P06753 SNORD121B-201ENST00000458838 81 ntBASIC1.86□□□□□ -2.11
TPM3P06753 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.86□□□□□ -2.11
TPM3P06753 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM3P06753 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AC107953.1-201ENST00000522216 297 ntBASIC1.86□□□□□ -2.11
TPM3P06753 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.86□□□□□ -2.11
TPM3P06753 AP001189.2-201ENST00000527320 189 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM3P06753 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.86□□□□□ -2.11
TPM3P06753 UBE2L4-201ENST00000587688 464 ntBASIC1.86□□□□□ -2.11
TPM3P06753 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.86□□□□□ -2.11
TPM3P06753 AP001542.2-201ENST00000593141 364 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AC091152.3-201ENST00000604227 325 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AC068944.2-201ENST00000610373 403 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AC087241.4-201ENST00000612441 480 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AL590808.1-201ENST00000618696 141 ntBASIC1.86□□□□□ -2.11
TPM3P06753 AC064859.1-201ENST00000624741 174 ntBASIC1.86□□□□□ -2.11
TPM3P06753 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.86□□□□□ -2.11
TPM3P06753 AP000648.3-201ENST00000623539 4507 ntBASIC1.86□□□□□ -2.11
TPM3P06753 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TPM3P06753 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TPM3P06753 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
TPM3P06753 AL079342.1-201ENST00000401460 267 ntBASIC1.85□□□□□ -2.11
TPM3P06753 MTCYBP38-201ENST00000417160 1123 ntBASIC1.85□□□□□ -2.11
TPM3P06753 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.85□□□□□ -2.11
TPM3P06753 AC009238.1-201ENST00000442165 424 ntBASIC1.85□□□□□ -2.11
TPM3P06753 RPL7P36-201ENST00000444633 681 ntBASIC1.85□□□□□ -2.11
TPM3P06753 AC009237.6-201ENST00000446969 424 ntBASIC1.85□□□□□ -2.11
TPM3P06753 AC244505.3-201ENST00000454598 187 ntBASIC1.85□□□□□ -2.11
TPM3P06753 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.85□□□□□ -2.11
TPM3P06753 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.85□□□□□ -2.11
TPM3P06753 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.85□□□□□ -2.11
TPM3P06753 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
TPM3P06753 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.85□□□□□ -2.11
TPM3P06753 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.85□□□□□ -2.11
TPM3P06753 AC233702.2-202ENST00000562547 291 ntBASIC1.85□□□□□ -2.11
TPM3P06753 AC004805.2-201ENST00000605382 482 ntBASIC1.85□□□□□ -2.11
TPM3P06753 uc_338.5-201ENST00000611839 155 ntBASIC1.85□□□□□ -2.11
TPM3P06753 AC022202.1-201ENST00000613515 211 ntBASIC1.85□□□□□ -2.11
TPM3P06753 AC107075.1-201ENST00000613695 314 ntBASIC1.85□□□□□ -2.11
TPM3P06753 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TPM3P06753 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TPM3P06753 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TPM3P06753 U3.13-201ENST00000364804 214 ntBASIC1.84□□□□□ -2.11
TPM3P06753 RNU6-637P-201ENST00000384050 107 ntBASIC1.84□□□□□ -2.11
TPM3P06753 U6.112-201ENST00000384129 70 ntBASIC1.84□□□□□ -2.11
TPM3P06753 RNU6-19P-201ENST00000384718 107 ntBASIC1.84□□□□□ -2.11
TPM3P06753 RNU6-253P-201ENST00000384730 105 ntBASIC1.84□□□□□ -2.11
TPM3P06753 RPL26P27-201ENST00000414397 437 ntBASIC1.84□□□□□ -2.11
TPM3P06753 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TPM3P06753 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
TPM3P06753 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TPM3P06753 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.84□□□□□ -2.11
TPM3P06753 AC005410.1-202ENST00000460347 485 ntBASIC1.84□□□□□ -2.11
TPM3P06753 RPL30P9-201ENST00000465586 330 ntBASIC1.84□□□□□ -2.11
TPM3P06753 AC092902.1-201ENST00000486999 259 ntBASIC1.84□□□□□ -2.11
TPM3P06753 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TPM3P06753 RNA5SP290-201ENST00000517133 127 ntBASIC1.84□□□□□ -2.11
TPM3P06753 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.84□□□□□ -2.11
TPM3P06753 AC021739.1-201ENST00000559631 174 ntBASIC1.84□□□□□ -2.11
TPM3P06753 AC138915.2-201ENST00000569776 97 ntBASIC1.84□□□□□ -2.11
TPM3P06753 MIR4672-201ENST00000583126 81 ntBASIC1.84□□□□□ -2.11
TPM3P06753 AC100814.1-201ENST00000606963 623 ntBASIC1.84□□□□□ -2.11
TPM3P06753 AC003001.2-201ENST00000616294 831 ntBASIC1.84□□□□□ -2.11
TPM3P06753 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
TPM3P06753 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TPM3P06753 RNU6-216P-201ENST00000363282 104 ntBASIC1.83□□□□□ -2.12
TPM3P06753 RNU6-1078P-201ENST00000364522 103 ntBASIC1.83□□□□□ -2.12
TPM3P06753 UBE2V1P15-201ENST00000407776 448 ntBASIC1.83□□□□□ -2.12
TPM3P06753 SNORA3.2-201ENST00000408221 125 ntBASIC1.83□□□□□ -2.12
TPM3P06753 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.83□□□□□ -2.12
TPM3P06753 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TPM3P06753 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.83□□□□□ -2.12
TPM3P06753 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.83□□□□□ -2.12
TPM3P06753 AL360221.1-201ENST00000445989 335 ntBASIC1.83□□□□□ -2.12
TPM3P06753 HMGN2P10-201ENST00000448085 265 ntBASIC1.83□□□□□ -2.12
TPM3P06753 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TPM3P06753 MRPL42P4-201ENST00000453267 443 ntBASIC1.83□□□□□ -2.12
TPM3P06753 AL049873.1-201ENST00000480540 376 ntBASIC1.83□□□□□ -2.12
TPM3P06753 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.83□□□□□ -2.12
TPM3P06753 AC084851.1-201ENST00000529105 249 ntBASIC1.83□□□□□ -2.12
TPM3P06753 AC006199.1-201ENST00000548728 219 ntBASIC1.83□□□□□ -2.12
TPM3P06753 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.83□□□□□ -2.12
TPM3P06753 AC044913.1-201ENST00000557200 430 ntBASIC1.83□□□□□ -2.12
TPM3P06753 AC110588.1-201ENST00000559699 137 ntBASIC1.83□□□□□ -2.12
TPM3P06753 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.83□□□□□ -2.12
TPM3P06753 AL031274.2-201ENST00000599419 203 ntBASIC1.83□□□□□ -2.12
TPM3P06753 AC010133.1-201ENST00000615809 842 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms