Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.24□□□□□ -1.89
RB1P06400 ARPC3P1-201ENST00000437218 533 ntBASIC3.24□□□□□ -1.89
RB1P06400 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.24□□□□□ -1.89
RB1P06400 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.24□□□□□ -1.89
RB1P06400 MIR2276-201ENST00000516886 89 ntBASIC3.24□□□□□ -1.89
RB1P06400 RNA5SP290-201ENST00000517133 127 ntBASIC3.24□□□□□ -1.89
RB1P06400 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.24□□□□□ -1.89
RB1P06400 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.24□□□□□ -1.89
RB1P06400 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.24□□□□□ -1.89
RB1P06400 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.24□□□□□ -1.89
RB1P06400 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.24□□□□□ -1.89
RB1P06400 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.24□□□□□ -1.89
RB1P06400 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.24□□□□□ -1.89
RB1P06400 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.24□□□□□ -1.89
RB1P06400 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.24□□□□□ -1.89
RB1P06400 AC015871.2-201ENST00000603605 948 ntBASIC3.24□□□□□ -1.89
RB1P06400 AC136601.2-201ENST00000604356 474 ntBASIC3.24□□□□□ -1.89
RB1P06400 AC007363.1-201ENST00000604736 620 ntBASIC3.24□□□□□ -1.89
RB1P06400 AC004832.5-201ENST00000608677 401 ntBASIC3.24□□□□□ -1.89
RB1P06400 AC006566.1-201ENST00000608943 513 ntBASIC3.24□□□□□ -1.89
RB1P06400 AC093783.1-201ENST00000612976 329 ntBASIC3.24□□□□□ -1.89
RB1P06400 AC009509.4-201ENST00000619202 509 ntBASIC3.24□□□□□ -1.89
RB1P06400 AC073308.1-201ENST00000623696 305 ntBASIC3.24□□□□□ -1.89
RB1P06400 AP003122.6-201ENST00000623831 495 ntBASIC3.24□□□□□ -1.89
RB1P06400 AC096644.4-201ENST00000563417 2912 ntBASIC3.24□□□□□ -1.89
RB1P06400 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.23□□□□□ -1.89
RB1P06400 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RB1P06400 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.23□□□□□ -1.89
RB1P06400 AC062016.1-201ENST00000355719 319 ntBASIC3.23□□□□□ -1.89
RB1P06400 RNY1P12-201ENST00000364251 105 ntBASIC3.23□□□□□ -1.89
RB1P06400 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RB1P06400 RNU6-817P-201ENST00000391083 104 ntBASIC3.23□□□□□ -1.89
RB1P06400 AC104651.1-201ENST00000427559 735 ntBASIC3.23□□□□□ -1.89
RB1P06400 AC093106.2-201ENST00000428212 385 ntBASIC3.23□□□□□ -1.89
RB1P06400 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.23□□□□□ -1.89
RB1P06400 BX679664.1-201ENST00000434429 253 ntBASIC3.23□□□□□ -1.89
RB1P06400 AL353706.1-201ENST00000436728 494 ntBASIC3.23□□□□□ -1.89
RB1P06400 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.23□□□□□ -1.89
RB1P06400 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.23□□□□□ -1.89
RB1P06400 RPL37P6-201ENST00000460682 294 ntBASIC3.23□□□□□ -1.89
RB1P06400 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
RB1P06400 KLF3P2-201ENST00000465138 268 ntBASIC3.23□□□□□ -1.89
RB1P06400 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
RB1P06400 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.23□□□□□ -1.89
RB1P06400 HIGD1AP13-201ENST00000509878 289 ntBASIC3.23□□□□□ -1.89
RB1P06400 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.23□□□□□ -1.89
RB1P06400 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.23□□□□□ -1.89
RB1P06400 SCGB1D5P-201ENST00000515134 247 ntBASIC3.23□□□□□ -1.89
RB1P06400 RN7SKP132-201ENST00000516001 208 ntBASIC3.23□□□□□ -1.89
RB1P06400 RNA5SP471-201ENST00000516971 106 ntBASIC3.23□□□□□ -1.89
RB1P06400 HMGB1P41-201ENST00000520234 440 ntBASIC3.23□□□□□ -1.89
RB1P06400 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.23□□□□□ -1.89
RB1P06400 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.23□□□□□ -1.89
RB1P06400 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.23□□□□□ -1.89
RB1P06400 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.23□□□□□ -1.89
RB1P06400 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.23□□□□□ -1.89
RB1P06400 MIR3167-201ENST00000579623 85 ntBASIC3.23□□□□□ -1.89
RB1P06400 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.23□□□□□ -1.89
RB1P06400 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.23□□□□□ -1.89
RB1P06400 AC098826.3-201ENST00000603823 466 ntBASIC3.23□□□□□ -1.89
RB1P06400 AL161798.1-201ENST00000604630 131 ntBASIC3.23□□□□□ -1.89
RB1P06400 ATP1B3P1-201ENST00000605365 821 ntBASIC3.23□□□□□ -1.89
RB1P06400 AC245008.1-201ENST00000608123 476 ntBASIC3.23□□□□□ -1.89
RB1P06400 GABRG2-229ENST00000641017 3628 ntBASIC3.23□□□□□ -1.89
RB1P06400 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RB1P06400 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RB1P06400 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RB1P06400 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
RB1P06400 RNU6-188P-201ENST00000364207 107 ntBASIC3.22□□□□□ -1.89
RB1P06400 Y_RNA.245-201ENST00000364493 95 ntBASIC3.22□□□□□ -1.89
RB1P06400 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
RB1P06400 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.22□□□□□ -1.89
RB1P06400 RNU6-1027P-201ENST00000383998 107 ntBASIC3.22□□□□□ -1.89
RB1P06400 RNU6-140P-201ENST00000384566 108 ntBASIC3.22□□□□□ -1.89
RB1P06400 RNU6-14P-201ENST00000384630 106 ntBASIC3.22□□□□□ -1.89
RB1P06400 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RB1P06400 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RB1P06400 AL139095.1-201ENST00000404326 391 ntBASIC3.22□□□□□ -1.89
RB1P06400 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.22□□□□□ -1.89
RB1P06400 CDK8P2-201ENST00000415020 547 ntBASIC3.22□□□□□ -1.89
RB1P06400 MTND3P17-201ENST00000416968 344 ntBASIC3.22□□□□□ -1.89
RB1P06400 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.22□□□□□ -1.89
RB1P06400 AC063976.3-201ENST00000426849 329 ntBASIC3.22□□□□□ -1.89
RB1P06400 RPL31P35-201ENST00000431058 377 ntBASIC3.22□□□□□ -1.89
RB1P06400 HMGB3P11-201ENST00000440127 604 ntBASIC3.22□□□□□ -1.89
RB1P06400 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.22□□□□□ -1.89
RB1P06400 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.22□□□□□ -1.89
RB1P06400 MTCO2P18-201ENST00000457151 658 ntBASIC3.22□□□□□ -1.89
RB1P06400 AL031183.1-201ENST00000457667 207 ntBASIC3.22□□□□□ -1.89
RB1P06400 AC117440.1-201ENST00000474107 571 ntBASIC3.22□□□□□ -1.89
RB1P06400 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.22□□□□□ -1.89
RB1P06400 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.22□□□□□ -1.89
RB1P06400 AC079140.3-201ENST00000511111 550 ntBASIC3.22□□□□□ -1.89
RB1P06400 RNU6-1220P-201ENST00000517126 108 ntBASIC3.22□□□□□ -1.89
RB1P06400 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
RB1P06400 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RB1P06400 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.22□□□□□ -1.89
RB1P06400 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.22□□□□□ -1.89
RB1P06400 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.22□□□□□ -1.89
RB1P06400 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms