Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC013562.2-201ENST00000611632 603 ntBASIC1.89□□□□□ -2.11
HLA-DQA1P01909 SCARNA17.4-201ENST00000614296 143 ntBASIC1.89□□□□□ -2.11
HLA-DQA1P01909 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DQA1P01909 MTND5P29-201ENST00000458676 1807 ntBASIC1.89□□□□□ -2.11
HLA-DQA1P01909 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 RNY4P24-201ENST00000362735 96 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 SNORA68.1-201ENST00000364537 132 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 RNY4P16-201ENST00000364768 94 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 RNA5SP37-201ENST00000365420 130 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 RNU1-73P-201ENST00000383971 164 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 MIR483-201ENST00000385070 76 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 RPL17P12-201ENST00000413391 526 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 ISCA1P1-201ENST00000426679 387 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC104651.1-201ENST00000427559 735 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AL365184.2-201ENST00000431139 435 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 GPM6BP2-201ENST00000432046 144 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC098826.1-201ENST00000433943 471 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 GPM6BP1-201ENST00000446387 144 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 FABP5P15-201ENST00000453566 214 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 snoU13.22-201ENST00000459428 104 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC107626.1-201ENST00000471084 183 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 RPS29P26-201ENST00000477483 171 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 RNA5SP282-201ENST00000516355 108 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 RN7SKP287-201ENST00000516546 266 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 MTND4LP18-201ENST00000526864 291 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 ZNF519P3-201ENST00000557158 1032 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC009094.1-201ENST00000564443 426 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AL353778.1-201ENST00000603149 408 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 MTCYBP22-201ENST00000603788 447 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC007363.1-201ENST00000604736 620 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC105129.3-201ENST00000605455 485 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC104010.1-201ENST00000616889 150 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AL137790.1-201ENST00000634283 177 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AC093591.3-201ENST00000634516 308 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 MIR7515-201ENST00000637837 67 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 AL359693.1-201ENST00000614959 2407 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DQA1P01909 PABPC1P9-201ENST00000426076 1612 ntBASIC1.88□□□□□ -2.11
HLA-DQA1P01909 ELF2P3-201ENST00000445099 1506 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 RNU6-288P-201ENST00000363690 104 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 SNORA67.1-201ENST00000364749 141 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 RNU6-301P-201ENST00000384277 107 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 RNU2-36P-201ENST00000410361 191 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 RNU2-68P-201ENST00000410878 191 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 ELOCP17-201ENST00000414751 326 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 USP9YP20-201ENST00000419224 558 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 ZNF90P2-204ENST00000419323 1075 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AL353777.1-201ENST00000425552 326 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AC098614.2-201ENST00000426040 255 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AC093106.2-201ENST00000428212 385 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AC092427.1-202ENST00000430569 476 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AC087499.2-201ENST00000432861 149 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 RPL36AP53-201ENST00000432891 316 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 RPL22P17-201ENST00000438729 315 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 EPS15P1-201ENST00000448836 336 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 RBM43P1-201ENST00000476891 1081 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 MTCYBP35-201ENST00000503630 1137 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 HMGB3P3-201ENST00000510526 400 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 RNU6-1129P-201ENST00000515964 104 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 IGLV3-17-201ENST00000519099 244 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 SUB1P1-201ENST00000524415 382 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DQA1P01909 AC007954.1-201ENST00000554198 494 ntBASIC1.87□□□□□ -2.11
HLA-DQA1P01909 MTATP6P24-201ENST00000576835 677 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms