Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRBV12-3P01733 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
TRBV12-3P01733 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.85□□□□□ -2.11
TRBV12-3P01733 MTND5P30-201ENST00000452896 1731 ntBASIC1.85□□□□□ -2.11
TRBV12-3P01733 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.85□□□□□ -2.11
TRBV12-3P01733 Z82209.1-201ENST00000422141 2135 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 MIR21-201ENST00000362134 72 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 RNU4-82P-201ENST00000362443 140 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 RNU6-512P-201ENST00000364438 103 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 SNORD114-30-201ENST00000364448 72 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRBV12-3P01733 Y_RNA.500-201ENST00000384466 111 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 SNORA41-201ENST00000384675 132 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 MIR218-1-201ENST00000384999 110 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC119751.3-201ENST00000399720 670 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 RPS4XP7-201ENST00000406274 780 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 RNU6-757P-201ENST00000410334 100 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 ZNF90P2-204ENST00000419323 1075 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRBV12-3P01733 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC084290.1-201ENST00000434995 374 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 RPS12P2-201ENST00000439728 269 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AL161651.1-201ENST00000440882 223 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AL139109.1-201ENST00000455491 297 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 ANKRD26P4-201ENST00000455755 950 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 USP9YP25-201ENST00000457708 443 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 RPL23AP41-201ENST00000484754 458 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 LINC00888-204ENST00000487386 421 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 RN7SL636P-201ENST00000497504 294 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRBV12-3P01733 HMGB3P3-201ENST00000510526 400 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC006199.1-201ENST00000548728 219 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 MIR3167-201ENST00000579623 85 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 BNIP3P23-201ENST00000599655 511 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC025588.2-201ENST00000604851 466 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC103810.6-201ENST00000606708 136 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC106052.1-201ENST00000608029 497 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 uc_338.14-201ENST00000613162 166 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC011939.3-201ENST00000613686 466 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC010678.1-201ENST00000614118 713 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.84□□□□□ -2.11
TRBV12-3P01733 MIR1291-201ENST00000627649 87 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 ZNF271P-202ENST00000465539 1970 ntBASIC1.84□□□□□ -2.11
TRBV12-3P01733 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.84□□□□□ -2.12
TRBV12-3P01733 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.84□□□□□ -2.12
TRBV12-3P01733 NACAP2-201ENST00000318548 624 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 RNU5A-8P-201ENST00000364102 114 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 U8.8-201ENST00000365399 135 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 RNU1-138P-201ENST00000384093 164 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 RNU6-769P-201ENST00000384407 104 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 RNU6-658P-201ENST00000384606 106 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 SNORA67.4-201ENST00000384688 142 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 RNU6-906P-201ENST00000384700 70 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AC007560.1-201ENST00000426912 237 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AC108059.3-201ENST00000456388 214 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 AC080013.2-201ENST00000460866 323 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRBV12-3P01733 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AP004247.1-201ENST00000531556 1289 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 OR5BN1P-201ENST00000532955 829 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 MIR4765-201ENST00000585007 77 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 AC091152.3-201ENST00000604227 325 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 BCRP9-201ENST00000605312 388 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 AC104237.2-201ENST00000612456 443 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 AC091965.5-201ENST00000624785 342 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 CTSLP2-204ENST00000629029 392 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 CU459211.1-201ENST00000635667 749 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.83□□□□□ -2.12
TRBV12-3P01733 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.83□□□□□ -2.12
TRBV12-3P01733 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms