Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC112220.3-201ENST00000605502 502 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF4O95639 AC009974.1-201ENST00000608881 455 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CPSF4O95639 AC010133.1-201ENST00000615809 842 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 AP000484.1-201ENST00000620067 1252 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 AC098657.3-201ENST00000620434 263 ntBASIC1.72□□□□□ -2.13
CPSF4O95639 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.72□□□□□ -2.13
CPSF4O95639 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CPSF4O95639 AC009902.3-201ENST00000606235 2172 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.71□□□□□ -2.14
CPSF4O95639 RNU6-462P-201ENST00000362659 105 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 SNORA4.1-201ENST00000364263 144 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 RNU6-432P-201ENST00000384196 109 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 TAS2R15P-201ENST00000390674 928 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 AC019129.1-201ENST00000403786 261 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 TXNP7-201ENST00000406296 293 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 RNU6-757P-201ENST00000410334 100 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 MTCO1P17-201ENST00000411522 491 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 PIGPP2-201ENST00000411569 458 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4O95639 UBE2FP1-201ENST00000416536 447 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 AC106883.1-201ENST00000418805 562 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 AC083875.1-201ENST00000419509 405 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 AL451054.2-201ENST00000420896 202 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.71□□□□□ -2.14
CPSF4O95639 AC084290.1-201ENST00000434995 374 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 RSU1P2-202ENST00000437884 485 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 PGBD4P3-201ENST00000440731 581 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 MTCYBP3-201ENST00000445588 1137 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 TPT1P14-201ENST00000448018 505 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.71□□□□□ -2.14
CPSF4O95639 RNU7-23P-201ENST00000459465 62 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 RBM43P1-201ENST00000476891 1081 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 MRPL42P6-201ENST00000486397 371 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 RPS15AP36-201ENST00000492022 382 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 AC138853.1-201ENST00000503549 823 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4O95639 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4O95639 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4O95639 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CPSF4O95639 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.71□□□□□ -2.14
CPSF4O95639 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4O95639 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4O95639 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.71□□□□□ -2.14
CPSF4O95639 AC060771.1-201ENST00000582031 164 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 MTCO2P2-201ENST00000591258 225 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 AC097478.2-201ENST00000610572 514 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 AC093838.1-201ENST00000613014 469 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 AC004852.3-201ENST00000614131 326 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4O95639 AC110994.2-201ENST00000635481 492 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 MIR203B-201ENST00000636080 86 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 MTND1P37-201ENST00000636562 264 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 KPNA2P1-201ENST00000458289 1591 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CPSF4O95639 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CPSF4O95639 AC106754.1-201ENST00000562632 1513 ntBASIC1.71□□□□□ -2.14
CPSF4O95639 MTND5P29-201ENST00000458676 1807 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CPSF4O95639 AL596028.1-201ENST00000326971 197 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 RNU1-105P-201ENST00000363470 161 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 RNU6-461P-201ENST00000364195 107 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 RNU6-217P-201ENST00000384164 104 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 RNU6-1072P-201ENST00000384703 107 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 RNU6-443P-201ENST00000384780 107 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 MIR767-201ENST00000390228 109 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 RSL24D1P4-201ENST00000400938 484 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4O95639 AL139413.1-201ENST00000421309 217 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.7□□□□□ -2.14
CPSF4O95639 AL035407.1-201ENST00000429211 571 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 RPL35AP22-201ENST00000436855 335 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CPSF4O95639 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4O95639 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.7□□□□□ -2.14
CPSF4O95639 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4O95639 RPS20P22-201ENST00000473700 357 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 RPL31P41-201ENST00000477967 372 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 SUMO2P6-201ENST00000505273 288 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4O95639 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4O95639 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4O95639 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4O95639 AC093809.1-201ENST00000509155 340 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.7□□□□□ -2.14
CPSF4O95639 AC113155.1-201ENST00000511141 769 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4O95639 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.7□□□□□ -2.14
CPSF4O95639 AL391261.3-201ENST00000557194 520 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.7□□□□□ -2.14
CPSF4O95639 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.7□□□□□ -2.14
CPSF4O95639 AF038458.1-201ENST00000588406 262 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4O95639 AC002545.1-201ENST00000592511 181 ntBASIC1.7□□□□□ -2.14
CPSF4O95639 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4O95639 AL161729.4-201ENST00000604650 476 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms