Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 FAM133CP-201ENST00000332869 704 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 RNU6-778P-201ENST00000363269 103 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN9O95484 RNU6-1072P-201ENST00000384703 107 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 RNU6-443P-201ENST00000384780 107 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 ANAPC10P1-201ENST00000395991 556 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 RPS4XP8-201ENST00000402039 771 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 AL139397.2-201ENST00000404529 772 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 RPL26P27-201ENST00000414397 437 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 AC096649.2-201ENST00000416186 393 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN9O95484 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN9O95484 HMGB1P9-201ENST00000429856 646 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 GPM6BP2-201ENST00000432046 144 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 OSTCP8-201ENST00000445117 448 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 GPM6BP1-201ENST00000446387 144 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.31□□□□□ -2.04
CLDN9O95484 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN9O95484 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN9O95484 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.31□□□□□ -2.04
CLDN9O95484 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN9O95484 RNU7-26P-201ENST00000458980 63 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 AC073901.1-201ENST00000462471 408 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.31□□□□□ -2.04
CLDN9O95484 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN9O95484 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN9O95484 AC008716.1-201ENST00000511084 513 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 AC022447.1-201ENST00000515358 464 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 RNA5SP148-201ENST00000516527 94 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 MTND4P33-201ENST00000556706 766 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 AC234778.2-201ENST00000566241 354 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 MTND1P8-201ENST00000571424 950 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.31□□□□□ -2.04
CLDN9O95484 AC007621.1-201ENST00000604544 437 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 AC087241.4-201ENST00000612441 480 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 AL139418.1-201ENST00000613613 177 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 MIR1291-201ENST00000627649 87 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 U2.21-201ENST00000637295 81 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 AL359693.1-201ENST00000614959 2407 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
CLDN9O95484 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN9O95484 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN9O95484 MAPK10-266ENST00000641066 6555 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 UBE2L2-201ENST00000254302 429 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 RNU6-931P-201ENST00000363850 107 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 RNU5A-8P-201ENST00000364102 114 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 RNU6-512P-201ENST00000364438 103 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN9O95484 TAS2R15P-201ENST00000390674 928 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 RNU6-278P-201ENST00000390945 109 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN9O95484 RNU6-1328P-201ENST00000410938 106 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN9O95484 HMGB1P11-201ENST00000413899 637 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN9O95484 NPM1P11-201ENST00000417106 855 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN9O95484 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN9O95484 RPL36AP53-201ENST00000432891 316 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 LARP1BP3-201ENST00000437229 869 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AC098831.1-201ENST00000440661 216 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN9O95484 EEF1B2P7-201ENST00000451177 676 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN9O95484 RPS3P1-201ENST00000456781 192 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN9O95484 AC026436.1-201ENST00000510537 270 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AC114781.4-201ENST00000513707 639 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN9O95484 Y_RNA.673-201ENST00000516306 88 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.3□□□□□ -2.04
CLDN9O95484 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN9O95484 DEFB108A-201ENST00000530110 222 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 NACAP3-201ENST00000552100 481 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AC027176.1-201ENST00000560204 514 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AL049838.1-201ENST00000563647 981 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.3□□□□□ -2.04
CLDN9O95484 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN9O95484 AC009163.5-201ENST00000575421 637 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 MIR5194-201ENST00000582634 120 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 MIR3616-201ENST00000584070 92 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 MIR4293-201ENST00000584305 78 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 MIR4658-201ENST00000584344 65 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN9O95484 MIR3199-2-201ENST00000636243 86 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 AC006927.4-201ENST00000639187 543 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CLDN9O95484 AC080128.1-201ENST00000474389 1917 ntBASIC2.3□□□□□ -2.04
CLDN9O95484 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CLDN9O95484 ZNF271P-202ENST00000465539 1970 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 MTND4P16-201ENST00000466108 1367 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 RNU4-82P-201ENST00000362443 140 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 RNU1-51P-201ENST00000365345 176 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.29□□□□□ -2.04
CLDN9O95484 RNU6-1083P-201ENST00000384022 107 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 RSL24D1P4-201ENST00000400938 484 ntBASIC2.29□□□□□ -2.04
CLDN9O95484 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms