Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.18□□□□□ -2.22
SNRNP200O75643 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.18□□□□□ -2.22
SNRNP200O75643 ARL2BPP5-201ENST00000523141 481 ntBASIC1.18□□□□□ -2.22
SNRNP200O75643 AP003066.2-201ENST00000529375 555 ntBASIC1.18□□□□□ -2.22
SNRNP200O75643 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.18□□□□□ -2.22
SNRNP200O75643 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.18□□□□□ -2.22
SNRNP200O75643 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.18□□□□□ -2.22
SNRNP200O75643 AL731537.2-201ENST00000561565 951 ntBASIC1.18□□□□□ -2.22
SNRNP200O75643 AC138915.2-201ENST00000569776 97 ntBASIC1.18□□□□□ -2.22
SNRNP200O75643 AC011260.1-201ENST00000578420 472 ntBASIC1.18□□□□□ -2.22
SNRNP200O75643 SNORD39.3-201ENST00000584451 71 ntBASIC1.18□□□□□ -2.22
SNRNP200O75643 AC015688.2-201ENST00000584523 262 ntBASIC1.18□□□□□ -2.22
SNRNP200O75643 AL031176.1-201ENST00000604554 466 ntBASIC1.18□□□□□ -2.22
SNRNP200O75643 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SNRNP200O75643 AC006213.5-201ENST00000619673 288 ntBASIC1.18□□□□□ -2.22
SNRNP200O75643 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.18□□□□□ -2.22
SNRNP200O75643 AC091925.2-201ENST00000625059 256 ntBASIC1.18□□□□□ -2.22
SNRNP200O75643 RNU6-650P-201ENST00000365658 111 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 RNU6-741P-201ENST00000383889 107 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 RNU6-481P-201ENST00000384194 107 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SNRNP200O75643 AL035405.1-201ENST00000400795 710 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 MIR934-201ENST00000401241 83 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 AL356432.1-201ENST00000405809 419 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 RNU2-42P-201ENST00000410697 113 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.17□□□□□ -2.22
SNRNP200O75643 AL512637.2-201ENST00000431287 1256 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 PABPC1P3-201ENST00000469174 459 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 FO393415.2-201ENST00000480085 343 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 AC022447.1-201ENST00000515358 464 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 Y_RNA.673-201ENST00000516306 88 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 RNU2-44P-201ENST00000516795 194 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.17□□□□□ -2.22
SNRNP200O75643 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 AC124293.1-201ENST00000530034 493 ntBASIC1.17□□□□□ -2.22
SNRNP200O75643 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.17□□□□□ -2.22
SNRNP200O75643 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.17□□□□□ -2.22
SNRNP200O75643 RNU6-1078P-201ENST00000364522 103 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 RNU6-657P-201ENST00000383904 107 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SNRNP200O75643 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SNRNP200O75643 RN7SKP51-201ENST00000410781 304 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.16□□□□□ -2.22
SNRNP200O75643 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.16□□□□□ -2.22
SNRNP200O75643 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.16□□□□□ -2.22
SNRNP200O75643 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.16□□□□□ -2.22
SNRNP200O75643 AL049714.1-201ENST00000466686 347 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.16□□□□□ -2.22
SNRNP200O75643 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.16□□□□□ -2.22
SNRNP200O75643 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.16□□□□□ -2.22
SNRNP200O75643 MIR4781-201ENST00000585250 76 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AC098848.2-201ENST00000588023 330 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AP001542.2-201ENST00000593141 364 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 DUXAP11-201ENST00000603858 526 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AC079791.1-201ENST00000605356 973 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AL118508.4-201ENST00000624142 1176 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 RNU1-72P-201ENST00000362976 153 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 U8.3-201ENST00000363321 132 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 Y_RNA.191-201ENST00000363972 113 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AP002784.2-201ENST00000397300 549 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 HMGN1P14-201ENST00000412459 517 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.16□□□□□ -2.22
SNRNP200O75643 MTCYBP11-201ENST00000447254 1109 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AC026801.1-201ENST00000497178 464 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 HMGB3P17-201ENST00000504195 649 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.16□□□□□ -2.22
SNRNP200O75643 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.16□□□□□ -2.22
SNRNP200O75643 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.16□□□□□ -2.22
SNRNP200O75643 AL355877.2-201ENST00000603670 358 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AC013553.2-201ENST00000604244 589 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AC026741.1-201ENST00000605892 482 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.16□□□□□ -2.22
SNRNP200O75643 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AC073592.7-201ENST00000623659 507 ntBASIC1.16□□□□□ -2.22
SNRNP200O75643 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
SNRNP200O75643 U3.20-201ENST00000390909 217 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 RNU6-882P-201ENST00000391025 103 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 TXNP7-201ENST00000406296 293 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.15□□□□□ -2.23
SNRNP200O75643 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.15□□□□□ -2.23
SNRNP200O75643 MTCO3P46-201ENST00000425787 232 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.15□□□□□ -2.23
SNRNP200O75643 THAP5P1-201ENST00000439089 262 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 MTCYBP3-201ENST00000445588 1137 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 RFC5P1-201ENST00000454419 874 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.15□□□□□ -2.23
SNRNP200O75643 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.15□□□□□ -2.23
SNRNP200O75643 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
SNRNP200O75643 AL671309.1-201ENST00000603750 544 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.15□□□□□ -2.23
SNRNP200O75643 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SNRNP200O75643 GDI2P1-201ENST00000429312 1336 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SNRNP200O75643 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 AC016716.1-201ENST00000265882 708 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SNRNP200O75643 DEFB108F-201ENST00000344638 222 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 MIR126-201ENST00000362291 85 ntBASIC1.15□□□□□ -2.23
SNRNP200O75643 Y_RNA.164-201ENST00000363709 102 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms