Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
USH2AO75445 AP005597.4-201ENST00000526762 229 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AP003484.1-201ENST00000530974 250 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.3□□□□□ -2.36
USH2AO75445 AC112487.2-201ENST00000637950 304 ntBASIC0.3□□□□□ -2.36
USH2AO75445 Y_RNA.204-201ENST00000364112 102 ntBASIC0.3□□□□□ -2.36
USH2AO75445 RNA5SP105-201ENST00000391123 113 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AL360221.1-201ENST00000445989 335 ntBASIC0.3□□□□□ -2.36
USH2AO75445 SUMO2P2-201ENST00000456482 255 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AC084033.1-201ENST00000550830 633 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AC084757.1-201ENST00000559987 490 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.3□□□□□ -2.36
USH2AO75445 AL022578.1-201ENST00000439330 1433 ntBASIC0.3□□□□□ -2.36
USH2AO75445 SNORA7.2-201ENST00000364446 145 ntBASIC0.3□□□□□ -2.36
USH2AO75445 U8.14-201ENST00000390843 143 ntBASIC0.3□□□□□ -2.36
USH2AO75445 RFESDP1-201ENST00000422350 461 ntBASIC0.3□□□□□ -2.36
USH2AO75445 RPL7P18-201ENST00000478965 734 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.3□□□□□ -2.36
USH2AO75445 OR5BM1P-201ENST00000512021 366 ntBASIC0.3□□□□□ -2.36
USH2AO75445 MTCO1P47-201ENST00000523889 1271 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.3□□□□□ -2.36
USH2AO75445 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.3□□□□□ -2.36
USH2AO75445 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.29□□□□□ -2.36
USH2AO75445 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
USH2AO75445 MIR26B-201ENST00000362251 77 ntBASIC0.29□□□□□ -2.36
USH2AO75445 Y_RNA.203-201ENST00000364106 102 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AC006461.1-201ENST00000412637 326 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
USH2AO75445 RPS26P56-201ENST00000444468 240 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AL034418.1-201ENST00000448675 860 ntBASIC0.29□□□□□ -2.36
USH2AO75445 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.29□□□□□ -2.36
USH2AO75445 AP003355.1-201ENST00000518956 587 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.29□□□□□ -2.36
USH2AO75445 MIR4493-201ENST00000584016 73 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AC004908.2-201ENST00000609090 574 ntBASIC0.29□□□□□ -2.36
USH2AO75445 SNORA67.1-201ENST00000364749 141 ntBASIC0.29□□□□□ -2.36
USH2AO75445 MIR938-201ENST00000401216 83 ntBASIC0.29□□□□□ -2.36
USH2AO75445 PTGES3P2-201ENST00000407942 482 ntBASIC0.29□□□□□ -2.36
USH2AO75445 RNU4-78P-201ENST00000410940 126 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.29□□□□□ -2.36
USH2AO75445 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.29□□□□□ -2.36
USH2AO75445 MRPS17P9-201ENST00000511924 393 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
USH2AO75445 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.29□□□□□ -2.36
USH2AO75445 AC005786.1-201ENST00000588553 154 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AC009090.3-201ENST00000616553 565 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.29□□□□□ -2.36
USH2AO75445 RNY3P14-201ENST00000384309 102 ntBASIC0.29□□□□□ -2.36
USH2AO75445 RNU6-955P-201ENST00000410497 104 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AC004022.2-201ENST00000413824 193 ntBASIC0.29□□□□□ -2.36
USH2AO75445 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
USH2AO75445 MTND5P15-201ENST00000434246 349 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AL022238.1-201ENST00000442557 355 ntBASIC0.29□□□□□ -2.36
USH2AO75445 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.29□□□□□ -2.36
USH2AO75445 HSPE1P14-201ENST00000605812 302 ntBASIC0.29□□□□□ -2.36
USH2AO75445 SNORD115-41-201ENST00000363608 82 ntBASIC0.29□□□□□ -2.36
USH2AO75445 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
USH2AO75445 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.29□□□□□ -2.36
USH2AO75445 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.29□□□□□ -2.36
USH2AO75445 CDC42P4-201ENST00000510507 563 ntBASIC0.29□□□□□ -2.36
USH2AO75445 RNU6-782P-201ENST00000516852 104 ntBASIC0.29□□□□□ -2.36
USH2AO75445 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.29□□□□□ -2.36
USH2AO75445 Y_RNA.410-201ENST00000383992 113 ntBASIC0.28□□□□□ -2.36
USH2AO75445 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
USH2AO75445 ZNF90P2-204ENST00000419323 1075 ntBASIC0.28□□□□□ -2.36
USH2AO75445 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.28□□□□□ -2.36
USH2AO75445 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.28□□□□□ -2.36
USH2AO75445 AL358794.1-201ENST00000445689 381 ntBASIC0.28□□□□□ -2.36
USH2AO75445 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.28□□□□□ -2.36
USH2AO75445 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
USH2AO75445 LINC00933-203ENST00000559812 219 ntBASIC0.28□□□□□ -2.36
USH2AO75445 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
USH2AO75445 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.28□□□□□ -2.36
USH2AO75445 AC145207.9-201ENST00000623802 325 ntBASIC0.28□□□□□ -2.36
USH2AO75445 MTND4P34-201ENST00000572715 1371 ntBASIC0.28□□□□□ -2.36
USH2AO75445 AC131280.1-202ENST00000624067 4211 ntBASIC0.28□□□□□ -2.36
USH2AO75445 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
USH2AO75445 SDAD1P3-201ENST00000427380 333 ntBASIC0.28□□□□□ -2.36
USH2AO75445 AC092628.1-201ENST00000436250 252 ntBASIC0.28□□□□□ -2.36
USH2AO75445 AC136932.1-201ENST00000574771 208 ntBASIC0.28□□□□□ -2.36
USH2AO75445 AC024060.1-201ENST00000607052 494 ntBASIC0.28□□□□□ -2.36
USH2AO75445 HMGB1P24-202ENST00000615653 685 ntBASIC0.28□□□□□ -2.36
USH2AO75445 Y_RNA.185-201ENST00000363894 100 ntBASIC0.28□□□□□ -2.36
USH2AO75445 C1DP3-201ENST00000455013 423 ntBASIC0.28□□□□□ -2.36
USH2AO75445 MTND3P24-201ENST00000506306 329 ntBASIC0.28□□□□□ -2.36
USH2AO75445 RNU6-567P-201ENST00000516746 107 ntBASIC0.28□□□□□ -2.36
USH2AO75445 AC025857.1-201ENST00000525252 377 ntBASIC0.28□□□□□ -2.36
USH2AO75445 AC109809.1-201ENST00000619665 545 ntBASIC0.28□□□□□ -2.36
USH2AO75445 AC000123.2-201ENST00000623124 461 ntBASIC0.28□□□□□ -2.36
USH2AO75445 AC114546.3-201ENST00000623582 1734 ntBASIC0.28□□□□□ -2.36
USH2AO75445 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.28□□□□□ -2.37
USH2AO75445 SNORA22-201ENST00000383907 134 ntBASIC0.28□□□□□ -2.37
USH2AO75445 RNU6-1181P-201ENST00000384191 106 ntBASIC0.28□□□□□ -2.37
USH2AO75445 SNORA22C-201ENST00000384614 134 ntBASIC0.28□□□□□ -2.37
USH2AO75445 HSFY3P-201ENST00000444242 1191 ntBASIC0.28□□□□□ -2.37
USH2AO75445 AC027575.1-201ENST00000481064 460 ntBASIC0.28□□□□□ -2.37
USH2AO75445 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.28□□□□□ -2.37
USH2AO75445 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.28□□□□□ -2.37
USH2AO75445 CCT4P2-201ENST00000233836 1548 ntBASIC0.28□□□□□ -2.37
USH2AO75445 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms