Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RNU6-1115P-201ENST00000362490 106 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 RNU2-33P-201ENST00000410344 192 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 UBE2D3P2-201ENST00000424409 445 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 RPEP3-201ENST00000425462 676 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 USMG5P1-201ENST00000425964 177 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF40AO75400 USP9YP30-201ENST00000430729 455 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 RPL23AP50-201ENST00000434149 455 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF40AO75400 PIGFP3-201ENST00000441918 722 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF40AO75400 FABP5P15-201ENST00000453566 214 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 SNORD5.1-201ENST00000458800 75 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF40AO75400 Y_RNA.661-201ENST00000516003 99 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 RNU1-86P-201ENST00000516108 154 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 RNU1-107P-201ENST00000516617 154 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.91□□□□□ -1.62
PRPF40AO75400 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF40AO75400 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF40AO75400 AC136443.5-201ENST00000603741 370 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 AC090132.2-201ENST00000615881 347 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.91□□□□□ -1.62
PRPF40AO75400 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF40AO75400 AC008568.2-201ENST00000623862 2313 ntBASIC4.91□□□□□ -1.62
PRPF40AO75400 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PRPF40AO75400 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF40AO75400 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF40AO75400 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PRPF40AO75400 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PRPF40AO75400 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PRPF40AO75400 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PRPF40AO75400 MIR412-201ENST00000362142 91 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 RNU6-600P-201ENST00000362524 99 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 RNA5SP175-201ENST00000364275 119 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 RNA5SP513-201ENST00000364648 118 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 MIR129-1-201ENST00000384972 72 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 MIR517A-201ENST00000385001 87 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 MIR607-201ENST00000385241 96 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF40AO75400 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.9□□□□□ -1.63
PRPF40AO75400 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF40AO75400 TOMM20P4-201ENST00000427861 435 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF40AO75400 KC877373.1-201ENST00000479066 408 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 VWA8P1-201ENST00000510889 176 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.9□□□□□ -1.63
PRPF40AO75400 MIR4284-201ENST00000578924 81 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 BNIP3P16-201ENST00000589779 534 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 MIR6810-201ENST00000622701 70 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF40AO75400 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF40AO75400 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF40AO75400 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF40AO75400 NCAPGP1-201ENST00000505112 1814 ntBASIC4.9□□□□□ -1.63
PRPF40AO75400 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF40AO75400 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF40AO75400 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF40AO75400 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF40AO75400 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF40AO75400 Y_RNA.5-201ENST00000362334 102 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 Y_RNA.151-201ENST00000363566 112 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.89□□□□□ -1.63
PRPF40AO75400 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF40AO75400 RPL7AP25-201ENST00000423357 805 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 C4BPAP2-201ENST00000428434 478 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 NDUFS5P3-201ENST00000450668 321 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 PCMTD1P1-201ENST00000455560 355 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF40AO75400 AC011005.2-201ENST00000487324 359 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.89□□□□□ -1.63
PRPF40AO75400 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF40AO75400 PTP4A1P4-201ENST00000512479 322 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.89□□□□□ -1.63
PRPF40AO75400 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF40AO75400 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.89□□□□□ -1.63
PRPF40AO75400 AC009643.1-201ENST00000532030 391 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF40AO75400 AC011494.1-201ENST00000596454 237 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 AC106900.2-201ENST00000604994 317 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 AL160281.1-201ENST00000605307 311 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 AC008121.3-201ENST00000618726 433 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 MIR7702-201ENST00000621931 59 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 AC091925.1-201ENST00000623204 462 ntBASIC4.89□□□□□ -1.63
PRPF40AO75400 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF40AO75400 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF40AO75400 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
PRPF40AO75400 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF40AO75400 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PRPF40AO75400 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF40AO75400 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.89□□□□□ -1.63
PRPF40AO75400 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.88□□□□□ -1.63
PRPF40AO75400 MTND4P1-201ENST00000457501 1466 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.88□□□□□ -1.63
PRPF40AO75400 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF40AO75400 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF40AO75400 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PRPF40AO75400 AC116096.1-201ENST00000566804 2314 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 Y_RNA.148-201ENST00000363557 117 ntBASIC4.88□□□□□ -1.63
PRPF40AO75400 RNU6-1106P-201ENST00000390845 107 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms