Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VAMP4O75379 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VAMP4O75379 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VAMP4O75379 RNU6-1252P-201ENST00000363054 104 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 RNU1-18P-201ENST00000363062 164 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 RNU6-1249P-201ENST00000363237 111 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 Y_RNA.145-201ENST00000363527 102 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 RNA5SP322-201ENST00000363617 119 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 Y_RNA.216-201ENST00000364205 93 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VAMP4O75379 RNU6-701P-201ENST00000384059 107 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 AC110754.1-201ENST00000399740 601 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 AL139397.2-201ENST00000404529 772 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 ATG3P1-201ENST00000419507 911 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 AC090774.1-201ENST00000435925 246 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.68□□□□□ -1.66
VAMP4O75379 MTND1P17-201ENST00000448961 204 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.68□□□□□ -1.66
VAMP4O75379 TRBV1-201ENST00000476502 284 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.68□□□□□ -1.66
VAMP4O75379 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.68□□□□□ -1.66
VAMP4O75379 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.68□□□□□ -1.66
VAMP4O75379 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.68□□□□□ -1.66
VAMP4O75379 AC090115.3-201ENST00000553218 849 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 MTCO3P23-201ENST00000561363 289 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 AC006270.2-201ENST00000578523 652 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 AL450472.3-201ENST00000615578 367 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VAMP4O75379 U73479.1-201ENST00000618062 168 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 AC008121.3-201ENST00000618726 433 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 AC103858.2-201ENST00000621471 543 ntBASIC4.68□□□□□ -1.66
VAMP4O75379 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.68□□□□□ -1.66
VAMP4O75379 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VAMP4O75379 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.68□□□□□ -1.66
VAMP4O75379 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
VAMP4O75379 AC007656.2-201ENST00000624902 4547 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.67□□□□□ -1.66
VAMP4O75379 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
VAMP4O75379 SNORD9-201ENST00000362566 104 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 SNORA23-201ENST00000365128 182 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VAMP4O75379 RNU6-837P-201ENST00000391056 108 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 NDUFS5P1-201ENST00000405668 289 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 SNORA11-201ENST00000408789 128 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 RNU6-370P-201ENST00000411008 104 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 BX682237.1-201ENST00000415016 335 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP4O75379 AC017079.2-201ENST00000416102 485 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP4O75379 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP4O75379 AC005019.1-201ENST00000436455 431 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 CYCSP43-201ENST00000438233 310 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 AC004866.2-201ENST00000438285 481 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.67□□□□□ -1.66
VAMP4O75379 AL121871.1-201ENST00000443413 436 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.67□□□□□ -1.66
VAMP4O75379 ELOCP24-201ENST00000456370 334 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.67□□□□□ -1.66
VAMP4O75379 RPS27P27-201ENST00000498779 255 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.67□□□□□ -1.66
VAMP4O75379 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.67□□□□□ -1.66
VAMP4O75379 AC093303.1-201ENST00000514549 295 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 RNU6-123P-201ENST00000516163 102 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 RNU6-273P-201ENST00000516937 96 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.67□□□□□ -1.66
VAMP4O75379 COPS8P3-201ENST00000526024 482 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 AP006587.4-201ENST00000526053 529 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.67□□□□□ -1.66
VAMP4O75379 AC106782.4-201ENST00000568264 210 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 MIR3941-201ENST00000582572 103 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.67□□□□□ -1.66
VAMP4O75379 AC022893.3-201ENST00000607665 437 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.67□□□□□ -1.66
VAMP4O75379 AC040896.1-201ENST00000613819 479 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 AC006133.1-201ENST00000617106 264 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 AC009093.8-201ENST00000641769 292 ntBASIC4.67□□□□□ -1.66
VAMP4O75379 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP4O75379 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP4O75379 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VAMP4O75379 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP4O75379 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP4O75379 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP4O75379 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.66□□□□□ -1.66
VAMP4O75379 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VAMP4O75379 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP4O75379 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP4O75379 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.66□□□□□ -1.66
VAMP4O75379 Y_RNA.135-201ENST00000363439 95 ntBASIC4.66□□□□□ -1.66
VAMP4O75379 RNU6-1188P-201ENST00000363795 107 ntBASIC4.66□□□□□ -1.66
VAMP4O75379 RNA5SP42-201ENST00000364278 115 ntBASIC4.66□□□□□ -1.66
VAMP4O75379 RNU6-712P-201ENST00000410558 100 ntBASIC4.66□□□□□ -1.66
VAMP4O75379 RNU6-954P-201ENST00000411355 107 ntBASIC4.66□□□□□ -1.66
VAMP4O75379 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.66□□□□□ -1.66
VAMP4O75379 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.66□□□□□ -1.66
VAMP4O75379 AC245054.2-201ENST00000415639 319 ntBASIC4.66□□□□□ -1.66
VAMP4O75379 PPP1R11P2-201ENST00000423543 382 ntBASIC4.66□□□□□ -1.66
VAMP4O75379 SKA2P1-201ENST00000425592 390 ntBASIC4.66□□□□□ -1.66
VAMP4O75379 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.66□□□□□ -1.66
VAMP4O75379 AC106707.2-201ENST00000484182 374 ntBASIC4.66□□□□□ -1.66
VAMP4O75379 RN7SKP83-201ENST00000516512 178 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms