Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RPS29P33-201ENST00000456717 146 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 RN7SKP210-201ENST00000459176 261 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 RPS29P27-201ENST00000463711 170 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CPNE3O75131 AC008897.1-201ENST00000494006 347 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 RN7SKP46-201ENST00000515942 234 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 Y_RNA.680-201ENST00000516441 93 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 AC091144.1-201ENST00000519573 138 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 AC034114.1-201ENST00000520293 285 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.67□□□□□ -1.66
CPNE3O75131 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.67□□□□□ -1.66
CPNE3O75131 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.67□□□□□ -1.66
CPNE3O75131 uc_338.18-201ENST00000615451 175 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 AC015914.2-201ENST00000618167 288 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 AL731566.2-201ENST00000618971 317 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 AC027309.3-201ENST00000623419 351 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 U4.7-201ENST00000638126 106 ntBASIC4.67□□□□□ -1.66
CPNE3O75131 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CPNE3O75131 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CPNE3O75131 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CPNE3O75131 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CPNE3O75131 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CPNE3O75131 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.66□□□□□ -1.66
CPNE3O75131 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CPNE3O75131 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.66□□□□□ -1.66
CPNE3O75131 Y_RNA.14-201ENST00000362415 103 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 RNA5SP191-201ENST00000362585 102 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 RNU6-336P-201ENST00000364891 107 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 MIR298-201ENST00000401212 88 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 MTCYBP2-201ENST00000407745 171 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 FAR2P2-201ENST00000413041 594 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.66□□□□□ -1.66
CPNE3O75131 BX510359.2-201ENST00000417920 305 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.66□□□□□ -1.66
CPNE3O75131 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.66□□□□□ -1.66
CPNE3O75131 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.66□□□□□ -1.66
CPNE3O75131 ENPP7P9-201ENST00000514456 627 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.66□□□□□ -1.66
CPNE3O75131 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.66□□□□□ -1.66
CPNE3O75131 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.66□□□□□ -1.66
CPNE3O75131 AC006077.1-201ENST00000604746 343 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 MIR6780A-201ENST00000615089 68 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CPNE3O75131 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CPNE3O75131 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CPNE3O75131 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.66□□□□□ -1.66
CPNE3O75131 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CPNE3O75131 SCN1A-220ENST00000641603 12506 ntBASIC4.66□□□□□ -1.66
CPNE3O75131 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CPNE3O75131 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.65□□□□□ -1.66
CPNE3O75131 MARK2P15-201ENST00000432204 2186 ntBASIC4.65□□□□□ -1.66
CPNE3O75131 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.65□□□□□ -1.66
CPNE3O75131 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.65□□□□□ -1.66
CPNE3O75131 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.65□□□□□ -1.66
CPNE3O75131 RNU1-76P-201ENST00000362903 159 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 SNORA73.1-201ENST00000363107 205 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 Y_RNA.123-201ENST00000363338 102 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CPNE3O75131 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CPNE3O75131 RNU6-708P-201ENST00000384217 107 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 RNU6-72P-201ENST00000384285 79 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 MIR325-201ENST00000385260 98 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 AC114755.2-201ENST00000413520 361 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 AC007738.1-201ENST00000413892 348 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.65□□□□□ -1.67
CPNE3O75131 MTCO3P29-201ENST00000432119 779 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.65□□□□□ -1.67
CPNE3O75131 AL450023.3-201ENST00000440592 271 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.65□□□□□ -1.67
CPNE3O75131 AC022795.1-201ENST00000473808 480 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 AC078918.1-201ENST00000498515 228 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.65□□□□□ -1.67
CPNE3O75131 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.65□□□□□ -1.67
CPNE3O75131 RNU6-570P-201ENST00000517051 105 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 AP003733.2-201ENST00000529409 171 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 AC010186.2-204ENST00000537668 439 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 AP006289.1-201ENST00000538089 277 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 AP001880.2-201ENST00000538233 448 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 MIR4782-201ENST00000577987 79 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 MIR3128-201ENST00000581957 66 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.65□□□□□ -1.67
CPNE3O75131 AC005255.1-201ENST00000593748 216 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 SCARNA4-202ENST00000625402 129 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CPNE3O75131 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.65□□□□□ -1.67
CPNE3O75131 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CPNE3O75131 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.65□□□□□ -1.67
CPNE3O75131 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.65□□□□□ -1.67
CPNE3O75131 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
CPNE3O75131 Z75746.1-201ENST00000440243 2080 ntBASIC4.65□□□□□ -1.67
CPNE3O75131 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms