Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RN7SL330P-201ENST00000469709 307 ntBASIC3□□□□□ -1.93
PRKNO60260 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3□□□□□ -1.93
PRKNO60260 AL049874.1-201ENST00000489560 388 ntBASIC3□□□□□ -1.93
PRKNO60260 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3□□□□□ -1.93
PRKNO60260 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3□□□□□ -1.93
PRKNO60260 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3□□□□□ -1.93
PRKNO60260 RNA5SP401-201ENST00000515920 127 ntBASIC3□□□□□ -1.93
PRKNO60260 RNU6-835P-201ENST00000516974 104 ntBASIC3□□□□□ -1.93
PRKNO60260 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3□□□□□ -1.93
PRKNO60260 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3□□□□□ -1.93
PRKNO60260 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3□□□□□ -1.93
PRKNO60260 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3□□□□□ -1.93
PRKNO60260 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3□□□□□ -1.93
PRKNO60260 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3□□□□□ -1.93
PRKNO60260 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3□□□□□ -1.93
PRKNO60260 DPPA3P3-201ENST00000603842 430 ntBASIC3□□□□□ -1.93
PRKNO60260 AL355810.1-201ENST00000614629 552 ntBASIC3□□□□□ -1.93
PRKNO60260 FER-210ENST00000628534 558 ntTSL 5 BASIC3□□□□□ -1.93
PRKNO60260 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PRKNO60260 MIR3662-201ENST00000637030 95 ntBASIC3□□□□□ -1.93
PRKNO60260 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PRKNO60260 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PRKNO60260 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3□□□□□ -1.93
PRKNO60260 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PRKNO60260 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3□□□□□ -1.93
PRKNO60260 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
PRKNO60260 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3□□□□□ -1.93
PRKNO60260 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.99□□□□□ -1.93
PRKNO60260 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PRKNO60260 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PRKNO60260 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
PRKNO60260 CKAP2P1-201ENST00000555477 2049 ntBASIC2.99□□□□□ -1.93
PRKNO60260 RNA5SP374-201ENST00000362939 125 ntBASIC2.99□□□□□ -1.93
PRKNO60260 RNU6-179P-201ENST00000363350 107 ntBASIC2.99□□□□□ -1.93
PRKNO60260 RNU6-996P-201ENST00000365438 107 ntBASIC2.99□□□□□ -1.93
PRKNO60260 RNU6-946P-201ENST00000383878 107 ntBASIC2.99□□□□□ -1.93
PRKNO60260 SNORA24.1-201ENST00000384401 135 ntBASIC2.99□□□□□ -1.93
PRKNO60260 U3.19-201ENST00000390893 196 ntBASIC2.99□□□□□ -1.93
PRKNO60260 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.99□□□□□ -1.93
PRKNO60260 RNU6-908P-201ENST00000410160 94 ntBASIC2.99□□□□□ -1.93
PRKNO60260 RNU6-55P-201ENST00000411092 107 ntBASIC2.99□□□□□ -1.93
PRKNO60260 RNU6-954P-201ENST00000411355 107 ntBASIC2.99□□□□□ -1.93
PRKNO60260 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.99□□□□□ -1.93
PRKNO60260 MTCYBP8-201ENST00000422855 651 ntBASIC2.99□□□□□ -1.93
PRKNO60260 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.99□□□□□ -1.93
PRKNO60260 RPL7L1P10-201ENST00000427790 463 ntBASIC2.99□□□□□ -1.93
PRKNO60260 BX679664.1-201ENST00000434429 253 ntBASIC2.99□□□□□ -1.93
PRKNO60260 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.99□□□□□ -1.93
PRKNO60260 SEPT14P3-201ENST00000439401 183 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AL732372.2-207ENST00000445840 183 ntBASIC2.99□□□□□ -1.93
PRKNO60260 SEPT14P2-201ENST00000453405 183 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.99□□□□□ -1.93
PRKNO60260 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.99□□□□□ -1.93
PRKNO60260 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.99□□□□□ -1.93
PRKNO60260 RNU7-182P-201ENST00000459009 62 ntBASIC2.99□□□□□ -1.93
PRKNO60260 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.99□□□□□ -1.93
PRKNO60260 AC110794.1-201ENST00000505816 425 ntBASIC2.99□□□□□ -1.93
PRKNO60260 HMGB3P15-201ENST00000507326 574 ntBASIC2.99□□□□□ -1.93
PRKNO60260 SEPT14P4-201ENST00000513445 186 ntBASIC2.99□□□□□ -1.93
PRKNO60260 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.99□□□□□ -1.93
PRKNO60260 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.99□□□□□ -1.93
PRKNO60260 FO082796.1-201ENST00000523795 183 ntBASIC2.99□□□□□ -1.93
PRKNO60260 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.99□□□□□ -1.93
PRKNO60260 SYF2P1-201ENST00000550658 413 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.99□□□□□ -1.93
PRKNO60260 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.99□□□□□ -1.93
PRKNO60260 AC037471.2-201ENST00000564941 598 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AC024619.4-201ENST00000580924 316 ntBASIC2.99□□□□□ -1.93
PRKNO60260 MIR548S-201ENST00000581352 82 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AC012493.2-201ENST00000595083 291 ntBASIC2.99□□□□□ -1.93
PRKNO60260 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.99□□□□□ -1.93
PRKNO60260 AL355073.2-201ENST00000612106 557 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AL020991.1-201ENST00000612314 373 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AL157817.1-201ENST00000614264 790 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.99□□□□□ -1.93
PRKNO60260 MIR8057-201ENST00000620957 69 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AC025034.2-201ENST00000623264 286 ntBASIC2.99□□□□□ -1.93
PRKNO60260 U6.114-201ENST00000636407 96 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AC002546.1-201ENST00000588041 2504 ntBASIC2.99□□□□□ -1.93
PRKNO60260 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.99□□□□□ -1.93
PRKNO60260 AF117829.1-206ENST00000621883 3802 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.99□□□□□ -1.93
PRKNO60260 AC006020.1-201ENST00000420179 1854 ntBASIC2.99□□□□□ -1.93
PRKNO60260 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.98□□□□□ -1.93
PRKNO60260 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PRKNO60260 OR4G2P-202ENST00000641004 1759 ntBASIC2.98□□□□□ -1.93
PRKNO60260 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PRKNO60260 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PRKNO60260 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
PRKNO60260 RNY3P14-201ENST00000384309 102 ntBASIC2.98□□□□□ -1.93
PRKNO60260 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PRKNO60260 RNU6-1068P-201ENST00000410958 103 ntBASIC2.98□□□□□ -1.93
PRKNO60260 ZNF90P2-204ENST00000419323 1075 ntBASIC2.98□□□□□ -1.93
PRKNO60260 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.98□□□□□ -1.93
PRKNO60260 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.98□□□□□ -1.93
PRKNO60260 AL353705.1-201ENST00000433468 480 ntBASIC2.98□□□□□ -1.93
PRKNO60260 CST9LP2-201ENST00000437612 320 ntBASIC2.98□□□□□ -1.93
PRKNO60260 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.98□□□□□ -1.93
PRKNO60260 AC004801.2-202ENST00000463559 283 ntBASIC2.98□□□□□ -1.93
PRKNO60260 AC108078.2-201ENST00000510750 236 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms