Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 Y_RNA.672-201ENST00000516289 104 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 RN7SKP282-201ENST00000516824 299 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 RNA5SP165-201ENST00000517142 115 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 MTCO1P47-201ENST00000523889 1271 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.66□□□□□ -1.82
NPHP1O15259 AC008088.1-201ENST00000580993 280 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 AL451064.1-201ENST00000607718 471 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 AC008498.1-201ENST00000613012 531 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 AC025594.3-201ENST00000613068 790 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 AC007318.2-201ENST00000620999 243 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.66□□□□□ -1.82
NPHP1O15259 FAM35CP-201ENST00000554755 2470 ntBASIC3.65□□□□□ -1.82
NPHP1O15259 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.65□□□□□ -1.82
NPHP1O15259 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPHP1O15259 AC073325.2-201ENST00000339545 159 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 HSPE1P11-201ENST00000339579 310 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 RNU5E-1-201ENST00000362477 120 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
NPHP1O15259 AL592148.1-201ENST00000413568 445 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHP1O15259 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AC007283.2-201ENST00000424739 197 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 SKA2P1-201ENST00000425592 390 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHP1O15259 AC093106.2-201ENST00000428212 385 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AC119618.1-201ENST00000434191 222 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AC009969.1-201ENST00000438726 172 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 MTND1P3-201ENST00000484956 952 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.65□□□□□ -1.83
NPHP1O15259 RNA5SP217-201ENST00000515959 91 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.65□□□□□ -1.83
NPHP1O15259 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.65□□□□□ -1.83
NPHP1O15259 MIR3945-201ENST00000581853 98 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHP1O15259 BNIP3P8-201ENST00000597863 560 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 DUXAP4-201ENST00000603046 613 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AC121247.2-201ENST00000604776 136 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AC107294.3-201ENST00000609211 526 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AC091304.9-201ENST00000612091 226 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 AL589994.2-201ENST00000621124 579 ntBASIC3.65□□□□□ -1.83
NPHP1O15259 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPHP1O15259 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPHP1O15259 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPHP1O15259 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPHP1O15259 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NPHP1O15259 MIR767-201ENST00000390228 109 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 RNA5SP354-201ENST00000391247 136 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 RNU2-52P-201ENST00000410680 190 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 RNU2-68P-201ENST00000410878 191 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHP1O15259 ATG3P1-201ENST00000419507 911 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.64□□□□□ -1.83
NPHP1O15259 AC137499.1-201ENST00000427602 88 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 MTND6P13-201ENST00000443510 523 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 NIPA2P5-201ENST00000452282 464 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.64□□□□□ -1.83
NPHP1O15259 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHP1O15259 TRBV12-1-201ENST00000479785 344 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 RN7SL20P-201ENST00000488827 297 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 NDUFB4P2-201ENST00000509515 391 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHP1O15259 RNU1-143P-201ENST00000516296 146 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.64□□□□□ -1.83
NPHP1O15259 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.64□□□□□ -1.83
NPHP1O15259 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHP1O15259 AC022634.1-201ENST00000520765 532 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 AC245166.1-201ENST00000521012 253 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 SUB1P1-201ENST00000524415 382 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.64□□□□□ -1.83
NPHP1O15259 AC012414.6-201ENST00000568241 401 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.64□□□□□ -1.83
NPHP1O15259 AC020895.1-201ENST00000595362 272 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 U1.23-201ENST00000610293 146 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 RNU1-68P-201ENST00000615382 146 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 U1.39-201ENST00000621562 146 ntBASIC3.64□□□□□ -1.83
NPHP1O15259 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.63□□□□□ -1.83
NPHP1O15259 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPHP1O15259 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NPHP1O15259 RNU6-778P-201ENST00000363269 103 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 RNU6-960P-201ENST00000364056 120 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 HMGN1P14-201ENST00000412459 517 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 RPL7P37-201ENST00000425095 738 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 USP9YP15-201ENST00000442391 422 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.63□□□□□ -1.83
NPHP1O15259 SNRPGP9-201ENST00000456025 225 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.63□□□□□ -1.83
NPHP1O15259 RAP1BP2-201ENST00000478270 544 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 AC009901.1-201ENST00000506703 541 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.63□□□□□ -1.83
NPHP1O15259 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.63□□□□□ -1.83
NPHP1O15259 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.63□□□□□ -1.83
NPHP1O15259 AC104763.2-201ENST00000604179 382 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 AC025811.1-201ENST00000604312 472 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 Z94722.1-201ENST00000604328 474 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 AL365204.3-201ENST00000612448 685 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 AC108479.2-201ENST00000617314 601 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.63□□□□□ -1.83
NPHP1O15259 MTND5P42-201ENST00000637720 498 ntBASIC3.63□□□□□ -1.83
NPHP1O15259 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms