Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC010975.2-201ENST00000427781 588 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 RPL31P35-201ENST00000431058 377 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP2A1O14983 RPS20P5-201ENST00000434808 360 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AC079448.1-201ENST00000449377 373 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 AC108938.1-201ENST00000451204 136 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 RPL21P8-201ENST00000465083 535 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP2A1O14983 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP2A1O14983 NRON-201ENST00000517270 370 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AP003392.2-201ENST00000527269 208 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AC079600.2-201ENST00000550076 130 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 ARL2BPP2-201ENST00000550907 489 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 TRAV37-201ENST00000553906 342 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AL391840.1-201ENST00000571144 367 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP2A1O14983 AC084782.3-201ENST00000612282 578 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP2A1O14983 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATP2A1O14983 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATP2A1O14983 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATP2A1O14983 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATP2A1O14983 RNU5A-6P-201ENST00000384136 116 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 SNORA46-201ENST00000384762 135 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 SAR1AP2-201ENST00000392696 594 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
ATP2A1O14983 RNU6-1077P-201ENST00000410506 102 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 RN7SKP140-201ENST00000411196 284 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AL451054.2-201ENST00000420896 202 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.29□□□□□ -1.88
ATP2A1O14983 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP2A1O14983 UBE2D3P2-201ENST00000424409 445 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.29□□□□□ -1.88
ATP2A1O14983 AL590383.1-201ENST00000428602 75 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.29□□□□□ -1.88
ATP2A1O14983 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP2A1O14983 AC020550.1-201ENST00000447385 163 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AL109933.2-201ENST00000452651 260 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP2A1O14983 RPL31P60-201ENST00000478450 367 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 RN7SL633P-201ENST00000488974 297 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 MTND2P33-201ENST00000506452 1031 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP2A1O14983 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.29□□□□□ -1.88
ATP2A1O14983 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.29□□□□□ -1.88
ATP2A1O14983 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.29□□□□□ -1.88
ATP2A1O14983 RNA5SP380-201ENST00000517190 98 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.29□□□□□ -1.88
ATP2A1O14983 AC087883.1-201ENST00000551882 391 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.29□□□□□ -1.88
ATP2A1O14983 AC009063.1-201ENST00000563342 702 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AC090132.2-201ENST00000615881 347 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.29□□□□□ -1.88
ATP2A1O14983 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.29□□□□□ -1.88
ATP2A1O14983 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.29□□□□□ -1.88
ATP2A1O14983 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 CR848007.1-201ENST00000442354 1699 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 AC092447.7-201ENST00000422212 1621 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATP2A1O14983 AP003122.5-201ENST00000527668 3766 ntBASIC3.29□□□□□ -1.88
ATP2A1O14983 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATP2A1O14983 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATP2A1O14983 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.28□□□□□ -1.88
ATP2A1O14983 AL365361.1-201ENST00000566942 3481 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATP2A1O14983 SNORD56.2-201ENST00000363242 71 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 MIR9-1-201ENST00000385198 89 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATP2A1O14983 RNU2-36P-201ENST00000410361 191 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AL513331.1-201ENST00000411908 397 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 RAC1P6-201ENST00000423911 575 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP2A1O14983 AC133104.1-201ENST00000429100 218 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 NDUFB4P6-201ENST00000436819 366 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.28□□□□□ -1.88
ATP2A1O14983 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AC092185.1-201ENST00000491371 97 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AC105252.1-201ENST00000503089 286 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
ATP2A1O14983 RNU7-51P-201ENST00000516560 62 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP2A1O14983 AP003072.2-201ENST00000527756 676 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AC124947.2-202ENST00000552735 133 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP2A1O14983 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.28□□□□□ -1.88
ATP2A1O14983 AL670379.6-201ENST00000603753 252 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AL670379.11-201ENST00000604059 253 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AC008162.1-201ENST00000604718 254 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AL670379.1-201ENST00000604752 252 ntBASIC3.28□□□□□ -1.88
ATP2A1O14983 AL670379.5-201ENST00000605253 252 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms