Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 HIGD1AP11-201ENST00000438361 280 ntBASIC3.08□□□□□ -1.92
CUX2O14529 EEF1A1P39-201ENST00000440791 250 ntBASIC3.08□□□□□ -1.92
CUX2O14529 AL031313.1-201ENST00000448435 256 ntBASIC3.08□□□□□ -1.92
CUX2O14529 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.08□□□□□ -1.92
CUX2O14529 RNA5SP310-201ENST00000459084 116 ntBASIC3.08□□□□□ -1.92
CUX2O14529 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
CUX2O14529 AC013444.2-201ENST00000603317 787 ntBASIC3.08□□□□□ -1.92
CUX2O14529 AL391834.2-201ENST00000609982 546 ntBASIC3.08□□□□□ -1.92
CUX2O14529 RMST_6.1-201ENST00000611980 203 ntBASIC3.08□□□□□ -1.92
CUX2O14529 AL121895.2-201ENST00000619558 447 ntBASIC3.08□□□□□ -1.92
CUX2O14529 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.08□□□□□ -1.92
CUX2O14529 AC090740.1-201ENST00000623193 2262 ntBASIC3.07□□□□□ -1.92
CUX2O14529 AL390862.1-201ENST00000635467 1469 ntBASIC3.07□□□□□ -1.92
CUX2O14529 AC110774.1-201ENST00000623567 2018 ntBASIC3.07□□□□□ -1.92
CUX2O14529 DEFB108F-201ENST00000344638 222 ntBASIC3.07□□□□□ -1.92
CUX2O14529 DHFRP6-201ENST00000401776 268 ntBASIC3.07□□□□□ -1.92
CUX2O14529 TPMTP2-201ENST00000414372 726 ntBASIC3.07□□□□□ -1.92
CUX2O14529 TMEM167AP1-201ENST00000423409 219 ntBASIC3.07□□□□□ -1.92
CUX2O14529 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.07□□□□□ -1.92
CUX2O14529 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.07□□□□□ -1.92
CUX2O14529 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.07□□□□□ -1.92
CUX2O14529 AL592447.1-201ENST00000447592 540 ntBASIC3.07□□□□□ -1.92
CUX2O14529 AC005410.1-202ENST00000460347 485 ntBASIC3.07□□□□□ -1.92
CUX2O14529 AC097493.1-201ENST00000463958 372 ntBASIC3.07□□□□□ -1.92
CUX2O14529 MTND1P16-201ENST00000465177 898 ntBASIC3.07□□□□□ -1.92
CUX2O14529 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.07□□□□□ -1.92
CUX2O14529 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.07□□□□□ -1.92
CUX2O14529 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CUX2O14529 DEFB108D-201ENST00000527787 222 ntBASIC3.07□□□□□ -1.92
CUX2O14529 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.07□□□□□ -1.92
CUX2O14529 MIR4421-201ENST00000578133 69 ntBASIC3.07□□□□□ -1.92
CUX2O14529 MIR151B-201ENST00000584249 96 ntBASIC3.07□□□□□ -1.92
CUX2O14529 AC011451.2-201ENST00000604303 598 ntBASIC3.07□□□□□ -1.92
CUX2O14529 AC004853.1-201ENST00000604902 698 ntBASIC3.07□□□□□ -1.92
CUX2O14529 AL157392.4-201ENST00000609756 345 ntBASIC3.07□□□□□ -1.92
CUX2O14529 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC3.07□□□□□ -1.92
CUX2O14529 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.06□□□□□ -1.92
CUX2O14529 Y_RNA.311-201ENST00000365068 96 ntBASIC3.06□□□□□ -1.92
CUX2O14529 RNU6-882P-201ENST00000391025 103 ntBASIC3.06□□□□□ -1.92
CUX2O14529 MTND1P23-201ENST00000416931 372 ntBASIC3.06□□□□□ -1.92
CUX2O14529 AL356320.2-201ENST00000417263 507 ntBASIC3.06□□□□□ -1.92
CUX2O14529 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.06□□□□□ -1.92
CUX2O14529 RPL27AP8-201ENST00000424277 446 ntBASIC3.06□□□□□ -1.92
CUX2O14529 HSFY7P-201ENST00000432672 318 ntBASIC3.06□□□□□ -1.92
CUX2O14529 AC024082.2-201ENST00000434771 238 ntBASIC3.06□□□□□ -1.92
CUX2O14529 HSFY8P-201ENST00000437934 318 ntBASIC3.06□□□□□ -1.92
CUX2O14529 HSFY5P-201ENST00000453726 309 ntBASIC3.06□□□□□ -1.92
CUX2O14529 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.06□□□□□ -1.92
CUX2O14529 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.06□□□□□ -1.92
CUX2O14529 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.06□□□□□ -1.92
CUX2O14529 AC034222.1-201ENST00000494052 532 ntBASIC3.06□□□□□ -1.92
CUX2O14529 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CUX2O14529 AL359273.1-201ENST00000510918 627 ntBASIC3.06□□□□□ -1.92
CUX2O14529 SNORA31.15-201ENST00000516771 132 ntBASIC3.06□□□□□ -1.92
CUX2O14529 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.06□□□□□ -1.92
CUX2O14529 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.06□□□□□ -1.92
CUX2O14529 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.06□□□□□ -1.92
CUX2O14529 AL390208.1-201ENST00000605885 644 ntBASIC3.06□□□□□ -1.92
CUX2O14529 MIR6076-201ENST00000617521 113 ntBASIC3.06□□□□□ -1.92
CUX2O14529 AL353748.2-201ENST00000622148 471 ntBASIC3.06□□□□□ -1.92
CUX2O14529 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.06□□□□□ -1.92
CUX2O14529 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CUX2O14529 RNU4-68P-201ENST00000364314 141 ntBASIC3.05□□□□□ -1.92
CUX2O14529 Y_RNA.465-201ENST00000384293 102 ntBASIC3.05□□□□□ -1.92
CUX2O14529 RNU6-952P-201ENST00000391164 108 ntBASIC3.05□□□□□ -1.92
CUX2O14529 HMGB1P17-201ENST00000403495 628 ntBASIC3.05□□□□□ -1.92
CUX2O14529 RNU2-43P-201ENST00000410306 190 ntBASIC3.05□□□□□ -1.92
CUX2O14529 AL139421.1-201ENST00000423010 169 ntBASIC3.05□□□□□ -1.92
CUX2O14529 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.05□□□□□ -1.92
CUX2O14529 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.05□□□□□ -1.92
CUX2O14529 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.05□□□□□ -1.92
CUX2O14529 WARS2P1-201ENST00000429678 537 ntBASIC3.05□□□□□ -1.92
CUX2O14529 OR10R1P-201ENST00000441524 1141 ntBASIC3.05□□□□□ -1.92
CUX2O14529 ZNF886P-201ENST00000450781 723 ntBASIC3.05□□□□□ -1.92
CUX2O14529 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.05□□□□□ -1.92
CUX2O14529 RPL31P60-201ENST00000478450 367 ntBASIC3.05□□□□□ -1.92
CUX2O14529 AC116353.3-201ENST00000511215 249 ntBASIC3.05□□□□□ -1.92
CUX2O14529 AC109445.1-201ENST00000512356 383 ntBASIC3.05□□□□□ -1.92
CUX2O14529 RNU6-711P-201ENST00000517255 106 ntBASIC3.05□□□□□ -1.92
CUX2O14529 CBX3P4-201ENST00000538909 354 ntBASIC3.05□□□□□ -1.92
CUX2O14529 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.05□□□□□ -1.92
CUX2O14529 AC106791.2-201ENST00000604680 391 ntBASIC3.05□□□□□ -1.92
CUX2O14529 AL590099.1-201ENST00000615276 138 ntBASIC3.05□□□□□ -1.92
CUX2O14529 AC010608.3-201ENST00000625048 527 ntBASIC3.05□□□□□ -1.92
CUX2O14529 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
CUX2O14529 EIF1AXP1-201ENST00000419267 435 ntBASIC3.04□□□□□ -1.92
CUX2O14529 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.04□□□□□ -1.92
CUX2O14529 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.04□□□□□ -1.92
CUX2O14529 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.04□□□□□ -1.92
CUX2O14529 ARPC3P5-201ENST00000448802 534 ntBASIC3.04□□□□□ -1.92
CUX2O14529 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.04□□□□□ -1.92
CUX2O14529 TRGVB-201ENST00000453257 471 ntBASIC3.04□□□□□ -1.92
CUX2O14529 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.04□□□□□ -1.92
CUX2O14529 snoU13.8-201ENST00000458890 104 ntBASIC3.04□□□□□ -1.92
CUX2O14529 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.04□□□□□ -1.92
CUX2O14529 AC079395.1-201ENST00000510981 262 ntBASIC3.04□□□□□ -1.92
CUX2O14529 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.04□□□□□ -1.92
CUX2O14529 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.04□□□□□ -1.92
CUX2O14529 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.04□□□□□ -1.92
CUX2O14529 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms