Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.37□□□□□ -1.71
RFXAPO00287 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.37□□□□□ -1.71
RFXAPO00287 MIR5195-201ENST00000583555 115 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 AL451044.1-201ENST00000604867 238 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 AC005000.2-201ENST00000605468 310 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RFXAPO00287 SNORD91B-202ENST00000608459 222 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RFXAPO00287 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFXAPO00287 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RFXAPO00287 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RFXAPO00287 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RFXAPO00287 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFXAPO00287 PABPC1P7-201ENST00000413177 1513 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RFXAPO00287 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RFXAPO00287 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RFXAPO00287 Y_RNA.48-201ENST00000362710 103 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 RNU1-83P-201ENST00000363426 164 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 RNU6-960P-201ENST00000364056 120 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 RNU6-338P-201ENST00000383888 105 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 Y_RNA.518-201ENST00000384552 113 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 SNORA41-201ENST00000384675 132 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 SNORD66.1-201ENST00000391230 76 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 PCNPP3-201ENST00000393579 471 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 RPS29P4-201ENST00000414733 161 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 RPL21P38-201ENST00000418090 167 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.36□□□□□ -1.71
RFXAPO00287 AC097713.2-201ENST00000430199 356 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC127537.2-201ENST00000439258 465 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 RPS17P13-201ENST00000448974 407 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.36□□□□□ -1.71
RFXAPO00287 OR2AQ1P-201ENST00000451972 200 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC133473.1-201ENST00000455173 299 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AL139109.1-201ENST00000455491 297 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC005008.1-201ENST00000456151 612 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 RN7SL293P-201ENST00000481765 281 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.36□□□□□ -1.71
RFXAPO00287 AC135721.1-201ENST00000497954 479 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC096745.1-201ENST00000509945 370 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RFXAPO00287 RNA5SP446-201ENST00000515955 82 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 RNU6-182P-201ENST00000516970 105 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC018442.3-201ENST00000523025 183 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.36□□□□□ -1.71
RFXAPO00287 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.36□□□□□ -1.71
RFXAPO00287 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.36□□□□□ -1.71
RFXAPO00287 AC026371.1-201ENST00000551867 419 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC109446.1-201ENST00000566172 220 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.36□□□□□ -1.71
RFXAPO00287 AC025588.3-201ENST00000604182 274 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AL589994.2-201ENST00000621124 579 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 AC091903.1-201ENST00000624322 454 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFXAPO00287 MAPK10-286ENST00000641208 8747 ntBASIC4.36□□□□□ -1.71
RFXAPO00287 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFXAPO00287 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RFXAPO00287 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RFXAPO00287 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFXAPO00287 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.36□□□□□ -1.71
RFXAPO00287 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RFXAPO00287 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFXAPO00287 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFXAPO00287 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.35□□□□□ -1.71
RFXAPO00287 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.35□□□□□ -1.71
RFXAPO00287 CDC27P2-201ENST00000425026 1922 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 HSPA8P4-201ENST00000511877 1920 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFXAPO00287 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
RFXAPO00287 Y_RNA.19-201ENST00000362462 99 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 RNA5SP307-201ENST00000362863 116 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 Y_RNA.151-201ENST00000363566 112 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 RNA5SP72-201ENST00000364442 117 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 RNU6-1303P-201ENST00000364841 107 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 RNU6-946P-201ENST00000383878 107 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 Y_RNA.399-201ENST00000383955 105 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 Y_RNA.785-201ENST00000384290 109 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 RNU6-393P-201ENST00000384475 107 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 MIR548I2-201ENST00000408348 149 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 RNU2-15P-201ENST00000410692 191 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 MIR1911-201ENST00000410783 80 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.35□□□□□ -1.71
RFXAPO00287 BX276092.3-201ENST00000424182 230 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 AP000907.1-201ENST00000428428 510 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.35□□□□□ -1.71
RFXAPO00287 GAPDHP27-201ENST00000447427 1020 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFXAPO00287 AC026801.1-201ENST00000497178 464 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.35□□□□□ -1.71
RFXAPO00287 AC092436.3-201ENST00000511788 257 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 AC104057.1-201ENST00000515547 497 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 RNU6-255P-201ENST00000516957 105 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFXAPO00287 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.35□□□□□ -1.71
RFXAPO00287 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.35□□□□□ -1.71
RFXAPO00287 SUB1P3-201ENST00000564581 315 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 MIR3133-201ENST00000583157 78 ntBASIC4.35□□□□□ -1.71
RFXAPO00287 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.35□□□□□ -1.71
RFXAPO00287 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.35□□□□□ -1.71
RFXAPO00287 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms